DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and lbx1b

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001156784.1 Gene:lbx1b / 793810 ZFINID:ZDB-GENE-050309-27 Length:265 Species:Danio rerio


Alignment Length:248 Identity:71/248 - (28%)
Similarity:101/248 - (40%) Gaps:51/248 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 HKPPPHNSTTASALLAPLHSLTSLQLTQQQQRF--LGKTP------------QQLLDIAPTSPAA 263
            |.|||.:|...   |.|. |:|.:......:||  :.:.|            :|.| |...||..
Zfish    23 HLPPPASSNKP---LTPF-SITDILSKPTVKRFHRIHRLPASDRVRQSITVSRQTL-ITQASPLC 82

  Fly   264 AAAATSQNGAHGHGGGNGQGNASAGSNG---------KRKRSWSRAVFSNLQRKGLEIQFQQQKY 319
            |....:.....|...|..|  |:.|.:|         .:||..||..|:|.|...||.:|..|||
Zfish    83 ALQELASKTFKGLELGVLQ--AAEGKDGLKLFGQRDSPKKRRKSRTAFTNHQLYELEKRFLHQKY 145

  Fly   320 ITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQE--KQPSAVP-----------ES 371
            ::..||.::|.:|.||:|||..||||||.|.:...|.:|:..|  :....||           ..
Zfish   146 LSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESVRSTGLVPLDKLAKLADLERC 210

  Fly   372 GGVFKTSTPSGDGTPQEALDY--------SSDSCSSVDLSEQADEDDNIEINV 416
            .....|..|....:|:...:|        |..|..|...|:...||:.:||:|
Zfish   211 AAAGATGNPGPQCSPRLGHEYKTVHKLCLSPMSSLSDHTSQDCSEDEEVEIDV 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/52 (52%)
lbx1bNP_001156784.1 Homeobox 124..178 CDD:395001 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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