DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and Nkx1-1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:138 Identity:48/138 - (34%)
Similarity:67/138 - (48%) Gaps:33/138 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 APTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWS----------RAVFSNLQRKGLE 311
            :|.:|...|.||   || |..|...|| |:..:..||||:.|          |..|:..|...||
Mouse   245 SPGAPGPPATAT---GA-GSAGSTPQG-AAVTTKPKRKRTGSDSKSGKPRRARTAFTYEQLVALE 304

  Fly   312 IQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFK 376
            .:|:..:|::..:|..||..|:||:.|||:||||||.||:          ::.|.|        .
Mouse   305 NKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK----------KQNPGA--------D 351

  Fly   377 TSTPSGDG 384
            ||.|:|.|
Mouse   352 TSAPTGGG 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 24/62 (39%)
Nkx1-1NP_035450.1 Homeobox 292..344 CDD:278475 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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