DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and Drgx

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001097075.2 Gene:Drgx / 5740176 FlyBaseID:FBgn0085369 Length:587 Species:Drosophila melanogaster


Alignment Length:122 Identity:45/122 - (36%)
Similarity:62/122 - (50%) Gaps:25/122 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 KRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPD---RRKLAARLNLTDAQVKVWFQNRRMKWRHT 353
            :||:..:|..|:..|.:.||..|.|..|   ||   |..||.::|||:|:|:|||||||.|||..
  Fly    49 RRKQRRNRTTFTLQQLEELETAFAQTHY---PDVFTREDLAMKINLTEARVQVWFQNRRAKWRKA 110

  Fly   354 RENLKSGQEKQPSAVPESGGVFKTSTPSGDGTPQEALDYSSDSC-SSVDLSEQADED 409
             |.||..|.|:.                 :|....:||...||. ||.|::.:.|:|
  Fly   111 -ERLKDEQRKRE-----------------NGESSSSLDKLHDSRESSPDITGEIDDD 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/55 (47%)
DrgxNP_001097075.2 Homeobox 56..108 CDD:278475 26/54 (48%)
OAR 428..445 CDD:281777
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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