DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and meox2a

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:359 Identity:96/359 - (26%)
Similarity:134/359 - (37%) Gaps:114/359 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 DGSILACCSFPHCFSQANAESRRFGHATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRPTP 166
            |.::..|...||...||           :.|.|   :.|..|                       
Zfish     2 DHTLFGCLRSPHAPPQA-----------VHPAF---ALHGRP----------------------- 29

  Fly   167 IRAAEHAAPTYPTLATNA----------------LLRFHQHQKQQHQQHHHHQHHPKHLHQQ--- 212
                ||.: :||.|::::                |...||......||.|||.||..||.||   
Zfish    30 ----EHLS-SYPDLSSSSPPSTCIVSGYPGEDGGLFGGHQRGLSVSQQQHHHHHHHHHLAQQGGW 89

  Fly   213 HKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAAAAATS-----QNG 272
            |.|   .|::||...|.:.  ..|.::....   |.:     |:.|..|:..|:..|     .:|
Zfish    90 HLP---QSSSASPSAAGVR--LGLGISGPDS---GSS-----DVGPGGPSLCASTPSLGAGVPSG 141

  Fly   273 AH----GHGGGNGQGNASAGSNGKRKRSWS-------------------RAVFSNLQRKGLEIQF 314
            |.    |..|.:....|.|.....::||.|                   |..|:..|.:.||.:|
Zfish   142 ASCVPGGDFGRHTMSPAEAEKRNSKRRSDSSESQDGNYKSDVSSKPRKERTAFTKEQIRELEAEF 206

  Fly   315 QQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFK-TS 378
            ....|:|:..|.::|..|:||:.|||||||||||||:    .:|.||:...:...|...|.| |.
Zfish   207 AHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK----RVKGGQQGAVAREKELVNVKKGTL 267

  Fly   379 TPS------GDGTPQEALDYSSDSCSSVDLSEQA 406
            .||      |..||...|: :.||..|...||.|
Zfish   268 LPSEFSGIAGLHTPDSLLN-NEDSQDSDQSSEHA 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/71 (37%)
meox2aXP_017206696.1 COG5576 161..267 CDD:227863 35/109 (32%)
Homeobox 191..243 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.