DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and barhl1a

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001017712.2 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:170 Identity:54/170 - (31%)
Similarity:76/170 - (44%) Gaps:40/170 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 PPPHNSTTASALLAPLHSL---TSLQLTQQQQ----RFLGKTPQQLLDI-APTSPAAAAAATSQN 271
            |.|..|:...|:.....:|   :.||::||.:    .||      :.|| |...|.||.|..|..
Zfish    49 PSPRRSSVEDAVQRRARALGLDSPLQISQQPRTVTSSFL------IRDILADCKPLAACAPYSST 107

  Fly   272 G------------AHGHGGGNGQ-------------GNASAGSNGKRKRSWSRAVFSNLQRKGLE 311
            |            .|.:...:.:             ...|..|..|:.|. :|..|::.|...||
Zfish   108 GQSAQDAEDCMDKLHSNSSSDSEYRVKDEADREISSSRDSPNSRLKKPRK-ARTAFTDHQLAQLE 171

  Fly   312 IQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWR 351
            ..|::|||::..||.:|||.|||||.|||.|:||||.||:
Zfish   172 RSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 28/52 (54%)
barhl1aNP_001017712.2 TPP_enzymes <122..177 CDD:294952 11/55 (20%)
Homeobox 159..211 CDD:278475 28/51 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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