DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and zfh2

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524623.2 Gene:zfh2 / 43795 FlyBaseID:FBgn0004607 Length:3005 Species:Drosophila melanogaster


Alignment Length:469 Identity:93/469 - (19%)
Similarity:161/469 - (34%) Gaps:124/469 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ESAASMEQ--SMPENLSTHMYGECEVNPTLAKCPDPVNVDH------ELPTKESCASTTIVSTSP 61
            ||...|.|  ::|..:..|.:..............|.|.::      .|...|......:...:.
  Fly  1825 ESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKVTPLND 1889

  Fly    62 TSATSTTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFG 126
            |.:.:.|....|.::     |.|...:...||..:..|    .:||.       .:|||......
  Fly  1890 TCSVAVTGPMTSSTI-----SLPPSGNINLSSKENATS----KVLAA-------GKANASGPVTF 1938

  Fly   127 HATLP-------PTFTPTSSHTYPFVGLDKLFPG---------PYM---DYKSVLRPTPIRAAEH 172
            .||:|       |..|.:|.:...::| :.:|.|         ||.   ..||..:...|.|.:.
  Fly  1939 SATVPVSTPLSRPESTNSSGNISDYIG-NNIFFGQLGSKEQILPYSLDGQIKSEPQDDMIGATDF 2002

  Fly   173 AAPTY--------------------------------------PTLATNALLRFHQHQKQQHQQH 199
            |..|.                                      .:||:|.       |.||....
  Fly  2003 AYQTKQHSSFSFLKQQQDLVDPPEQCLTNQNADTAQDQSLLAGSSLASNC-------QSQQQINI 2060

  Fly   200 HHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQ--------QQQRFLGKTPQQLLDI 256
            ...:..........:||..||..|..:...::.|.:.||..        ::.:.:|||.::  ::
  Fly  2061 FETKSESGSSDVLSRPPSPNSGAAGNVYGSMNDLLNQQLENMGSNMGPPKKMQIVGKTFEK--NV 2123

  Fly   257 APTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYIT 321
            ||...:.:.:...::.:     .|...::|:.|.|||.   :|..|::.|.|.|:..|:...|..
  Fly  2124 APMVTSGSVSTQFESNS-----SNSSSSSSSTSGGKRA---NRTRFTDYQIKVLQEFFENNSYPK 2180

  Fly   322 KPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTSTPSGDGTP 386
            ..|...|:..|.|:...:.|||||.|.|.|...||       ||     :..:|:     .:.|.
  Fly  2181 DSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYEN-------QP-----NNTLFE-----NEETK 2228

  Fly   387 QEALDYSSDSCSSV 400
            ::.::|:...|:.|
  Fly  2229 KQNINYACKKCNLV 2242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 18/52 (35%)
zfh2NP_524623.2 C2H2 Zn finger 561..581 CDD:275368
C2H2 Zn finger 616..633 CDD:275368
C2H2 Zn finger 1515..1542 CDD:275371
C2H2 Zn finger 1543..1564 CDD:275371
HOX 1797..1853 CDD:197696 6/27 (22%)
Homeobox 2158..2210 CDD:278475 18/51 (35%)
Homeobox 2764..2816 CDD:278475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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