DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and zfh1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:495 Identity:103/495 - (20%)
Similarity:155/495 - (31%) Gaps:166/495 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 NLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIVSTSPTSATSTTKVKLSFSVDRLLG 81
            :.|:||        |..||     :...|....:.|....:..||.||:|.::...|   |...|
  Fly   397 SFSSHM--------TSKKC-----ISMGLKLNNNRALLKRLEKSPGSASSASRRSPS---DHGKG 445

  Fly    82 SEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHATLPPTFTPTSSHTYPFVG 146
            ..||:        ||..           ..||..|...::::..|.:..|..|.|          
  Fly   446 KLPEQ--------PSLP-----------GLPHPMSYFASDAQVQGGSAAPAPFPP---------- 481

  Fly   147 LDKLFPGPYMDYKSVLRPTPIRAAEHAAPTYPTL------------ATNALLRFHQHQKQQHQQH 199
                |...||:...:..|....||  ||...|.:            |.....|..:.::||.||.
  Fly   482 ----FHPNYMNAALLAFPHNFMAA--AAGLDPRVHPYSIQRLLQLSAAGQQQREEEREEQQKQQQ 540

  Fly   200 HHHQH---HPKHLHQQHKP------PPHNSTTASALLA----------PLHSLTSLQLTQQQQRF 245
            |..:.   .||.:....:|      |...:|.|:..:.          |....:|.|..:|:|..
  Fly   541 HDEEETPDEPKLVMDIEEPETKEMAPTPEATEAATPIKREESREASPDPESYRSSSQAIKQEQEP 605

  Fly   246 LG-----KTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGN--------------------- 284
            |.     :||.:  :.||...||....:..:....|.....|..                     
  Fly   606 LNVAEERQTPVE--EHAPVEHAADLRCSRCSKQFNHPTELVQHEKVLCGLIKEELEQHFQQQQAT 668

  Fly   285 ----ASAGSNGK-----------RKRSWSRAVFSNLQRKGLEIQFQQQKYI-------TKPDR-- 325
                |||....:           |:.|..|.|     |....|..:||:.:       .:|.|  
  Fly   669 SFALASASEEDEEDEEMDVEEEPRQESGERKV-----RVRTAINEEQQQQLKQHYSLNARPSRDE 728

  Fly   326 -RKLAARLNLTDAQVKVWFQNRRMKWRH------------------------TREN--LKSGQEK 363
             |.:||||.|....|:|||||.|.:.|.                        |||:  |....::
  Fly   729 FRMIAARLQLDPRVVQVWFQNNRSRERKMQSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKR 793

  Fly   364 QPSAVPESGGVFKTSTPSGDGTPQEALDYSSDSCSSVDLS 403
            .|............:.|||:....||::.|....:|..:|
  Fly   794 DPLTPKSESSPPYIAPPSGEALNPEAINLSRKFSTSASMS 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 21/62 (34%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-C2H2 355..377 CDD:278523
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:290200
Homeobox 703..755 CDD:278475 18/51 (35%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:290200
COG5048 992..>1045 CDD:227381
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:290200
C2H2 Zn finger 1025..1042 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.000

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