Protein Alignment H2.0 and ro

DIOPT Version :9

• Sequence 1: NP_523488.2
• Gene: H2.0 / 33841
• FlyBaseID: FBgn0001170
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 410
• Identity: 103/410 - (25%)
• Similarity: 149/410 - (36%)
• Gaps: 144/410 - (35%)

  Fly    37 DPVNVDHELPTKESCASTTIVSTSPTSATSTTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCC 101
            ||:            |:|||:|. |...:|..:.     .:||.|      |.::.||
  Fly    24 DPI------------ANTTILSV-PQRPSSPRQF-----FERLYG------HLETRSS------- 57

  Fly   102 DGSILACCSFPHCFSQANAESRRFGHATLPPTF-TPTSSH----TYPFVGLDKLFPGPYMDYKSV 161
                            .|.|.....||..||.. ||..|.    :.|.:.:.        |.::.
  Fly    58 ----------------ENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISIS--------DERTS 98

  Fly   162 LRPTPIRAAEHAAPTYPTLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASAL 226
            |...|.......|..||           ||..|||||||||.|||..|
  Fly    99 LAAYPAYDFYGHAKDYP-----------QHPSQQHQQHHHHHHHPPQL----------------- 135

  Fly   227 LAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGH---GGGNGQGNASAG 288
               :|                   |:|..::|  |.|.||..:.|....|   .|.....:.|||
  Fly   136 ---VH-------------------QKLSYVSP--PPAIAAGGAANPVLPHAFPAGFPSDPHFSAG 176

  Fly   289 ----------SNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWF 343
                      ..|:::|  .|..||..|...||::|.:.:||::..|.:||..|.||:.|:|:||
  Fly   177 FSAFLARRRRKEGRQRR--QRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWF 239

  Fly   344 QNRRMKWRHTRENLKSGQEKQ--PSAVPESG------GVFKTSTPSGDGTPQEA----LDYSSDS 396
            ||||.|    .:.::..|..|  .:.|..:|      |...|:.|.|..|...|    |:|.:.:
  Fly   240 QNRRAK----DKRIEKAQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAA 300

  Fly   397 CSSVDLSEQADEDDN-IEIN 415
            .:...|.:...:|.| |:|:
  Fly   301 ATPAALPKDNTQDANFIDID 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
H2.0	NP_523488.2	Homeobox	298..351	CDD:278475	24/52 (46%)
ro	NP_524521.1	Homeobox	196..247	CDD:278475	23/54 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.000