DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and C15

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:424 Identity:102/424 - (24%)
Similarity:145/424 - (34%) Gaps:142/424 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASMEQSMPENLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIV----------STSPT 62
            :|.|:...|:.:.|  || ||.      ...::||.:..::.||.|.:.|          |.:|.
  Fly     2 SSHEEDDHEHENEH--GE-EVE------EQEIHVDVDSDSRMSCGSGSDVDMDGGSCYDESETPL 57

  Fly    63 SAT-------STTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANA 120
            |.:       |::...|.||:.|||....|.||...:::....|...||           |..|.
  Fly    58 SESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGS-----------SSNNN 111

  Fly   121 ESRRFG----------HATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAP 175
            .|...|          |.......|..::.||....  .|:..|::                   
  Fly   112 NSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAA--ALYSYPHL------------------- 155

  Fly   176 TYPTLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQ 240
             ||:.|...:||.                           ||.. |..:..|.|||...   |..
  Fly   156 -YPSAAGGHVLRV---------------------------PPQR-TPLTWALPPLHHAA---LAH 188

  Fly   241 QQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNL 305
            |               |.....|||...::...|.:           .:....||...|..|:.:
  Fly   189 Q---------------AVKDRLAAAFPIARRIGHPY-----------QNRTPPKRKKPRTSFTRI 227

  Fly   306 QRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKW-RHTRENLKSGQEK------ 363
            |...||.:|.:|||:...:|..||..|.:||||||.||||||.|| |.|.|..::.::.      
  Fly   228 QVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLML 292

  Fly   364 --QPSAVPESGGVFKTSTPSG-----DGTPQEAL 390
              |..|:  |.|....|.|.|     :|.|..||
  Fly   293 SLQAEAI--SKGFAPPSAPLGSQGGVNGAPLAAL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/53 (51%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 43/131 (33%)
Homeobox 220..273 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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