DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and tin

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster


Alignment Length:392 Identity:90/392 - (22%)
Similarity:131/392 - (33%) Gaps:169/392 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 FGHATLPPTFTPTS------SHTYPF--------VGLDKLFPGPYMDYKSVLRPTPIRAA-EHAA 174
            :.|.|..|  :|.|      .:|.||        |...:.:.|.|.........:.:.|| |:..
  Fly    15 YDHYTQSP--SPGSLTNADALNTTPFSVKDILNMVNQTEAYEGSYGHIDGAATASALFAAGEYQN 77

  Fly   175 PTYPTLATNALLRFHQHQKQQ---HQQHHHHQH-------------------H-----------P 206
            |       :..|...|||:.:   .||..||||                   |           |
  Fly    78 P-------HQYLNHQQHQQSELPIPQQQLHHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMP 135

  Fly   207 KHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQ-----------------QRFLGK------ 248
            .|:.|.|...||.|..        ||.::..::..|                 ..:.|.      
  Fly   136 AHMFQHHHGHPHQSFQ--------HSASAYNMSASQFYAGASATAYQTPATYNYNYAGSGEVYGG 192

  Fly   249 ------------------TPQQLLDI----------APT-----SPAA------AAAATSQNGAH 274
                              ||...||:          |||     :|.:      |:.::|....:
  Fly   193 ATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETASNSSSLRSIY 257

  Fly   275 GHGGG-----NGQ--------------GNASAGSNG-------KRKRSWSRAVFSNLQRKGLEIQ 313
            |...|     |.|              ||::.|||.       |||   .|.:||..|...||.:
  Fly   258 GSDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSGSTKPRMKRK---PRVLFSQAQVLELECR 319

  Fly   314 FQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMK-----------WRHTRENLKSGQEKQPSA 367
            |:.:||:|..:|..:|.:|||:..|||:||||||.|           .:|.:  |||.....|::
  Fly   320 FRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGDIDCEGIAKHLK--LKSEPLDSPTS 382

  Fly   368 VP 369
            :|
  Fly   383 LP 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 25/63 (40%)
tinNP_524433.1 HOX 301..357 CDD:197696 28/58 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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