DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and HHEX

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster


Alignment Length:365 Identity:102/365 - (27%)
Similarity:153/365 - (41%) Gaps:70/365 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 STTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHATL 130
            :|...|.:||::.:| .:...|||..|...|::|  ..::.|..:.||..:...| |...|.::.
  Fly     4 ATKSSKAAFSIENIL-EQKSSSHRSQSRRGSSQS--PVAVTAGIATPHALAMPKA-SLATGSSSA 64

  Fly   131 PPTFTPTSSHTYPFVGLDKL---FPGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQHQ 192
            .||.:|:|:.....:..:..   :....||..:||.||.:|    ..|.||..|:    .|:|  
  Fly    65 APTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLR----FNPIYPDPAS----LFYQ-- 119

  Fly   193 KQQHQQHHHHQHHPKHLHQQHKPP---PHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLL 254
                          :.|..|..|.   ||....|.|..|      ::|.|....::   :|..:.
  Fly   120 --------------QVLQLQKNPSLFMPHFQAAAVAAAA------AVQPTAYCDQY---SPFTMD 161

  Fly   255 DIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAG---SNGKRKRSWSRAVFSNLQRKGLEIQFQQ 316
            .....:||:||||...|           ...:|.   ||...||...:..|::.|.|.||.:|..
  Fly   162 CEGFPNPASAAAALYCN-----------AYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFAS 215

  Fly   317 QKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQP---SAVPESGGVFKTS 378
            .||::..:||.||.:|.|||.|||.||||||.|||....:.:|...:.|   :||........:|
  Fly   216 SKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSS 280

  Fly   379 TP-----SGDGTPQEALDYSSDSCSSVDLSEQADEDDNIE 413
            .|     ||....|:     ||....:.|||..::||..|
  Fly   281 VPVLNLGSGSRCGQQ-----SDEEDRMYLSEDDEDDDEDE 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/52 (50%)
HHEXNP_650938.2 Homeobox 200..250 CDD:278475 26/49 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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