DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and Hmx

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001262674.1 Gene:Hmx / 42110 FlyBaseID:FBgn0264005 Length:718 Species:Drosophila melanogaster


Alignment Length:443 Identity:109/443 - (24%)
Similarity:149/443 - (33%) Gaps:168/443 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQSMPENLSTHMYGECEVNPTLAKCPDPVNVD----HELPTKES--------CASTTIVSTSPTS 63
            :||..|.||..|           |.|:....|    |.|....|        |||....:.:...
  Fly   148 QQSHVERLSPPM-----------KSPERNGGDEVQGHSLNNNNSKALNHNNTCASAAAAAAAAAV 201

  Fly    64 AT--------------------STTKVK--LSFSVDRLLG-SEPEESHRQSS--------SSPST 97
            |.                    |||...  .|||:..:|. |||.:.:..:.        ..|..
  Fly   202 AAANLSNNSNDSNGSSGGGGGKSTTGSNGFTSFSISSILSRSEPAKKNGAAGLITPIPQLPQPGA 266

  Fly    98 KSCCDGSILACCSFPHCFSQANAESRRFGHATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVL 162
            ....|.::|:...|   .||..|.:.|:  |.|.|...|.:....|       |..|..|..|..
  Fly   267 GGPQDAAMLSRLGF---ISQWGALAGRY--AALCPPGWPWAPQRLP-------FHSPTHDSSSTN 319

  Fly   163 R----PTP-------------IRAAEHAA----------PTYPTLATNALLRFHQHQKQQHQQHH 200
            .    |:|             ..|:.:.|          |.|..|.:..    .|.|:||||||.
  Fly   320 TTENPPSPTSMSPNNNNNNSNTTASSNQASKSPSHHPLHPLYHPLGSQQ----QQQQQQQHQQHP 380

  Fly   201 HHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAAA 265
            ..|.||:...|||   ||..||                                   |||.:::.
  Fly   381 QQQQHPQQQQQQH---PHQPTT-----------------------------------PTSSSSSG 407

  Fly   266 AATS--------QNGAHG---------------------HGGGNGQGNASA---GSNGKRKRSWS 298
            ..:|        ..|:||                     ..|.:|..::|:   ..|.|||:. :
  Fly   408 GGSSLTHHPHPHLTGSHGGYLLPSSSNESDEEGEEIIEEDDGTDGPSDSSSPHGDGNSKRKKK-T 471

  Fly   299 RAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWR 351
            |.|||..|...||..|..::|::..:|..|||.|.||:.|||:||||||.||:
  Fly   472 RTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWK 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/52 (50%)
HmxNP_001262674.1 Homeobox 471..524 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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