DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and ftz

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:371 Identity:86/371 - (23%)
Similarity:129/371 - (34%) Gaps:124/371 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHATLPPTFTPTSSHTYPFV 145
            |..|:||:.:|                      |:...|.|  :....|:||. .||:       
  Fly    49 GYYPQESYSES----------------------CYYYNNQE--QVTTQTVPPV-QPTT------- 81

  Fly   146 GLDKLFPGPYMDYKSVLRPTP------IRAAEHAAPTYPTLATNALLRFHQHQKQQHQQHHHHQH 204
                  |.|    |:..|...      |.|.|....|...|.||.:.:.              ::
  Fly    82 ------PPP----KATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKL--------------KY 122

  Fly   205 HPKHLH---QQHKPPPHNSTTASALLAPLHSLTSLQL------------------TQQQQRFLG- 247
            .|.:.:   :|.|..|..||..:|..||.:....:.:                  :|.|:...| 
  Fly   123 TPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNGD 187

  Fly   248 ------KTPQQL-----LDIAPTSPA-AAAAATSQNGAHG-HGGGNGQGN----------ASAGS 289
                  .||..|     :...|.||. .:::|.||...|. ....||.|:          ||...
  Fly   188 FATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTAPNGAGDFNWSHIEETLASDCK 252

  Fly   290 NGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTR 354
            :.||    :|..::..|...||.:|...:|||:..|..:|..|:|::.|:|:||||||||.:..|
  Fly   253 DSKR----TRQTYTRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDR 313

  Fly   355 ENLKSGQEKQPSAVPESGGVFKTSTPSGDGTPQEALDYSSDSCSSV 400
             .|.|..|       ..|..:....|     |.||...::....||
  Fly   314 -TLDSSPE-------HCGAGYTAMLP-----PLEATSTATTGAPSV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 22/52 (42%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 49/254 (19%)
Homeobox 257..310 CDD:278475 22/52 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.920

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