DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and lab

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:536 Identity:120/536 - (22%)
Similarity:183/536 - (34%) Gaps:205/536 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LHESAASMEQSMPENLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIVSTSPTSATST 67
            ||.|:.|...|..|:.|.|.|.......|:|   .|.|             ::.::.:..||||.
  Fly   141 LHPSSHSPADSYYESDSVHSYYATAAVATVA---PPSN-------------SSPITAANASATSN 189

  Fly    68 TKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHA-TLP 131
            |:            .:.:::...||.:....:..|      |.:|    .|.|::...|:| .:.
  Fly   190 TQ------------QQQQQAAIISSENGMMYTNLD------CMYP----TAQAQAPVHGYAGQIE 232

  Fly   132 PTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRA-----AEHAAPTYPTLATNAL-LRFHQ 190
            ..:......:|.        ||..::.:..:.....::     .:|.|.:|...|.::| :..|.
  Fly   233 EKYAAVLHASYA--------PGMVLEDQDPMMQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHM 289

  Fly   191 H-------------------------QKQQHQQHHHHQHHPKHLHQQHKP--------------- 215
            |                         |:|.|||..|.|:.....||||..               
  Fly   290 HHGLPHGHLGNLANNPHQQQPQVQQQQQQPHQQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRG 354

  Fly   216 ---PPHNSTTASALL------------APLHSLTSLQLTQ--QQQRFLGKTPQQLLDIAPTSPAA 263
               .|.:||::|...            :|.|| :|:...:  |.:|.:.| ||     ||..||:
  Fly   355 GVISPGSSTSSSTSASNGAHPASTQSKSPNHS-SSIPTYKWMQLKRNVPK-PQ-----APKLPAS 412

  Fly   264 AAAAT---SQNG-----AHGHGGGNGQGN-----------------------------ASAGS-- 289
            ..|:.   ..||     ..|.|||:|.||                             |:|||  
  Fly   413 GIASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNGSPGIGGVLSVQNSLIMANSAAAAGSAH 477

  Fly   290 -NG-----------------KRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTD 336
             ||                 ....:..|..|:|.|...||.:|...:|:|:..|.::|..|.|.:
  Fly   478 PNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNE 542

  Fly   337 AQVKVWFQNRRMKW-RHTRENL----------------KSGQEKQPSAVPE----------SGGV 374
            .|||:||||||||. :..:|.|                |..|::||.. ||          .|..
  Fly   543 TQVKIWFQNRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQP-PELQLKSQGSDLGGNE 606

  Fly   375 FKTSTPSGDGTPQEAL 390
            ..|..||   ||..|:
  Fly   607 LATGAPS---TPTTAM 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 24/53 (45%)
labNP_476613.1 Homeobox 505..557 CDD:278475 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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