DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and otx5

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_851848.2 Gene:otx5 / 353179 ZFINID:ZDB-GENE-030508-1 Length:289 Species:Danio rerio


Alignment Length:125 Identity:42/125 - (33%)
Similarity:65/125 - (52%) Gaps:16/125 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 SQNGAHGHGGGNGQGNASAG-SNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPD---RRKLA 329
            |.||....|.|....:::.| .|..||:...|..|:..|...||..|.:.:|   ||   |.::|
Zfish    11 SVNGLTLTGTGMDLLHSAVGYPNTPRKQRRERTTFTRAQLDVLEALFSKTRY---PDIFMREEVA 72

  Fly   330 ARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEK-QPSAVPESGGVFKTSTPSGDGTPQE 388
            .::||.:::|:|||:|||.|.|..::...|||.| :|   |:     |.|:|:.|.:..|
Zfish    73 LKINLPESRVQVWFKNRRAKCRQQQQQQTSGQTKPRP---PK-----KKSSPARDSSASE 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 21/55 (38%)
otx5NP_851848.2 Homeobox 42..94 CDD:278475 21/54 (39%)
TF_Otx 157..231 CDD:281521
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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