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Protein Alignment H2.0 and prd
DIOPT Version :9
Sequence 1: | NP_523488.2 |
Gene: | H2.0 / 33841 |
FlyBaseID: | FBgn0001170 |
Length: | 418 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_723721.1 |
Gene: | prd / 34629 |
FlyBaseID: | FBgn0003145 |
Length: | 613 |
Species: | Drosophila melanogaster |
Alignment Length: | 140 |
Identity: | 48/140 - (34%) |
Similarity: | 63/140 - (45%) |
Gaps: | 35/140 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 257 APTSPAA-AAAATSQNGAHGHGGGNGQGNAS----------AGSNGKRKRSWSRAVFSNLQRKGL 310
|..|||. ...|:|..|:...||.:..|..| .|...|||:...|..||..|...|
Fly 164 ASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDEL 228
Fly 311 EIQFQQQKYITKPD---RRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESG 372
|..|::.:| || |.:||.|.|||:|:::|||.|||.:.| ||.::| ||
Fly 229 ERAFERTQY---PDIYTREELAQRTNLTEARIQVWFSNRRARLR-----------KQHTSV--SG 277
Fly 373 GVFKTSTPSG 382
| .|.|
Fly 278 G-----APGG 282
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
H2.0 | NP_523488.2 |
Homeobox |
298..351 |
CDD:278475 |
24/55 (44%) |
prd | NP_723721.1 |
PAX |
27..154 |
CDD:238076 |
|
Homeobox |
217..269 |
CDD:278475 |
24/54 (44%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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