DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and Pph13

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster


Alignment Length:161 Identity:53/161 - (32%)
Similarity:70/161 - (43%) Gaps:57/161 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 KRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPD---RRKLAARLNLTDAQVKVWFQNRRMKWRHT 353
            |||:...|..|:.||.:.||..||:..|   ||   |.:||.|::||:|:|:|||||||.|||. 
  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHY---PDVFFREELAVRIDLTEARVQVWFQNRRAKWRK- 67

  Fly   354 RENLKSGQEKQPSAVPESGGVFK-------------------TSTPSGDGT------PQ--EALD 391
                   |||    :...||.:|                   .|...|.||      ||  .:||
  Fly    68 -------QEK----IGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLD 121

  Fly   392 ------YSSDSCSSVDLSEQADEDDNIEINV 416
                  |.:.:.|...||      .||.:|:
  Fly   122 NELKASYGTGAMSPSRLS------PNIFLNL 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/55 (49%)
Pph13NP_477330.1 Homeobox 14..66 CDD:278475 27/54 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.000

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