DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and B-H2

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster


Alignment Length:516 Identity:109/516 - (21%)
Similarity:164/516 - (31%) Gaps:196/516 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SMPENLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIVSTSPTSATSTTKVKLSFSVD 77
            :||..:|..........|: |....|..|...:|...|.|    |.::.|:||:||..:..|.:.
  Fly     3 TMPPEMSATTAAPVGSAPS-ATAHHPAAVGGGMPRPASPA----VGSNTTTATATTATRSRFMIT 62

  Fly    78 RLLGSEPEESHRQSSSSPSTKSCCDG-------------SILACCSF------PHCFSQANAESR 123
            .:|......|...::::.:..:...|             |::|....      .|...|...:.:
  Fly    63 DILAGAAAASAAAAAAAAALAAASSGGGRGSPTDSEREQSLVAQHHHHHQQQQQHHHHQQQQQQQ 127

  Fly   124 RFGHATL-------------------------------PPTFTPTSSHTYPFVGLDKLFPGPYMD 157
            :...|.|                               ||...|.:.|                 
  Fly   128 QHQQAALQQYIVQQQQLLRFEREREREREREHYRERHSPPGNNPYAHH----------------- 175

  Fly   158 YKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQHQKQQHQQHHHHQHH----------------- 205
                  |.|.....|..|     |..|:|:  |.|:||.||.|.|.||                 
  Fly   176 ------PMPPHLLAHFPP-----AHYAVLQ--QQQQQQQQQQHPHPHHLQLERERLEALHRHGHG 227

  Fly   206 -----PKHL-------HQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLG----------- 247
                 .:||       ||||.|..|:         |:|...|......||  ||           
  Fly   228 LTGDPAQHLSHLSHLSHQQHHPHLHH---------PMHDERSRSPLMLQQ--LGGNGGNNNNNNN 281

  Fly   248 -------KTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGN----GQGNASAG------------- 288
                   .........:..|...:..::|.|..:|.|.||    |.|::.:|             
  Fly   282 NSSSASNNNNNNNNSASANSNIISGNSSSSNNNNGSGNGNMLLGGPGSSISGDQASTIDDSDSDD 346

  Fly   289 -----------------SNG----------KRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRR 326
                             :||          .:|:..:|..|::.|.:.||..|::|||::..||.
  Fly   347 CGGKDDDGDDSMKNGSSANGDSSSHLSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRM 411

  Fly   327 KLAARLNLTDAQVKVWFQNRRMKW-RHTRENLKSGQEKQPSAVPESGGVFKTSTPSGDGTP 386
            :||.:|.|:|.|||.|:||||.|| |.|...|:        .:.|:|.........|..||
  Fly   412 ELANKLELSDCQVKTWYQNRRTKWKRQTAVGLE--------LLAEAGNYAAFQRLYGGATP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/53 (49%)
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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