DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and hlx1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_009293289.1 Gene:hlx1 / 327096 ZFINID:ZDB-GENE-030131-5304 Length:357 Species:Danio rerio


Alignment Length:432 Identity:112/432 - (25%)
Similarity:153/432 - (35%) Gaps:169/432 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLHESAASMEQSMPENLSTHMYGECEVNPTLAKC-PDPVNVDHELPTKESCASTTIVSTSPTSAT 65
            :||...|...|. ..:|..|:....:|:.:.:.. |.||..|..|..........:.|.:..:|.
Zfish    40 ILHVGDAENIQG-SSSLMAHIGARAQVHSSGSPLRPSPVTPDARLHPAYLRHGIHLTSRAAINAP 103

  Fly    66 STTKVKLSFSVDRLLGSEPEESHRQSSS--------SPSTKSCCDGSILACCSFPHCFSQANAES 122
            ..|...|.|.:||:|.::.|...::|.|        ||:.:|..                     
Zfish   104 PPTSKDLKFGIDRILSTDFEPKSKESPSLRDLTSIVSPNRQSAV--------------------- 147

  Fly   123 RRFGHATLPPTFT---PTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNA 184
                |.:..|.|.   ||.|.|...:|             |:                    .||
Zfish   148 ----HVSASPYFASIDPTMSETSSLMG-------------SI--------------------GNA 175

  Fly   185 LLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKT 249
            ..:..|||.|                                                       
Zfish   176 ARQSGQHQFQ------------------------------------------------------- 185

  Fly   250 PQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQF 314
                 |..|..|.|..:..:....:                 ||||||||||||||||||||.:|
Zfish   186 -----DTFPGRPYAVLSKDTMPQTY-----------------KRKRSWSRAVFSNLQRKGLEKRF 228

  Fly   315 QQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE--NLKSGQEKQPSAVPESGGVFKT 377
            :.|||:|||||::|||.|.|||||||||||||||||||::|  ..|..:::||.           
Zfish   229 EIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEKEQPD----------- 282

  Fly   378 STPSGDGTPQEALDYSSDSCSSVDLSEQADED---DNIEINV 416
              .|...|.|:..|   ||....:.||...||   |..::::
Zfish   283 --KSAAETEQKERD---DSECETEPSESEFEDGPEDKSDVDI 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 43/52 (83%)
hlx1XP_009293289.1 Homeobox 212..265 CDD:278475 43/52 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595379
Domainoid 1 1.000 99 1.000 Domainoid score I7056
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009017
OrthoInspector 1 1.000 - - oto39870
orthoMCL 1 0.900 - - OOG6_110467
Panther 1 1.100 - - LDO PTHR46808
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.700

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