DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and CG11085

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:125 Identity:44/125 - (35%)
Similarity:61/125 - (48%) Gaps:15/125 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 AAAATSQNGAHGHGGGNGQGNASAGSNG-----------KRKRSWSRAVFSNLQRKGLEIQFQQQ 317
            ||||:..||.....||:|.|:....|.|           .||....|..|::.|...||.:|:.|
  Fly   118 AAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQ 182

  Fly   318 KYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTR----ENLKSGQEKQPSAVPESGG 373
            ||::..||..:|..|||::.|||.|:||||.||:...    |.|:.....:...|.:.||
  Fly   183 KYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGG 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 27/59 (46%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 25/55 (45%)

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