DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and dbx1a

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_571233.1 Gene:dbx1a / 30394 ZFINID:ZDB-GENE-000128-8 Length:314 Species:Danio rerio


Alignment Length:324 Identity:97/324 - (29%)
Similarity:142/324 - (43%) Gaps:88/324 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 YKSVLRPTPIRAAEHAA-PTYPTLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQ--HKP--PP 217
            |.:.:||.   |:.|:. |.:|:.....|||.::               |.....|  |.|  .|
Zfish    13 YSAFMRPA---ASLHSPFPAHPSFLVEDLLRINR---------------PSGFLSQTAHSPCASP 59

  Fly   218 HNSTTASALLAP----LHSLTSLQLTQQQQRFLGKTPQQLLD-----------IAPTSPAAAAAA 267
            .|||..|   .|    :....|..:|::......|||....|           :|| ||..|.:.
Zfish    60 PNSTPLS---IPDNCRILDRVSPGITEKHGPCSPKTPVSSKDPTYLKFGVSAILAP-SPKKATSP 120

  Fly   268 TSQNGAHGHG------GGN--------------------GQGNASAGSNGKRKRSW-SRAVFSNL 305
            .|.:..|..|      .|:                    |..:....:.||.:|.. .|||||::
Zfish   121 PSVHSIHPKGFSVPYFDGSFCPFVRSSYFPAPSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDV 185

  Fly   306 QRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHT--RENLKSG---QEKQP 365
            |||.||..||:||||:||||:||||:|.|.|:|||:||||||||||::  ||.|.||   ::..|
Zfish   186 QRKALEKMFQKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQTLP 250

  Fly   366 SAV---PESGGVFKTSTPSGDG-----------TPQEALDYSSDSCSSVDLSEQADEDDNIEIN 415
            :..   |:...|.|.|:...|.           :|:..:..|:||..:...|:.::.:|.|.::
Zfish   251 TKTNPHPDLSDVGKKSSEDEDEDDACAPSHFCLSPRRVMSNSTDSSITFKHSDFSESEDEITVS 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 38/52 (73%)
dbx1aNP_571233.1 Homeobox 178..231 CDD:278475 38/52 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..279 11/44 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 292..314 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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