DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and dharma

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_571054.1 Gene:dharma / 30170 ZFINID:ZDB-GENE-990415-22 Length:192 Species:Danio rerio


Alignment Length:113 Identity:32/113 - (28%)
Similarity:47/113 - (41%) Gaps:22/113 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 PTSPAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITK 322
            |...|.|...|::|..|              :..:|.|...|.||::.|.:.||..|....|.|.
Zfish    92 PWPYAVAGCETAENHYH--------------TIAQRPRGRIRTVFTDNQTEQLERLFAVTDYPTV 142

  Fly   323 PDRRKLAARLNLTDAQVKVWFQNRRMKW--------RHTRENLKSGQE 362
            ..|.:||....|::..|:|||:|||.:.        :|....|:..||
Zfish   143 ETRAELAQNTGLSEETVRVWFKNRRARRKRQTTCADKHANRALEDHQE 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 20/60 (33%)
dharmaNP_571054.1 Homeobox 119..171 CDD:278475 20/51 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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