DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and pitx2

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_571050.1 Gene:pitx2 / 30164 ZFINID:ZDB-GENE-990714-27 Length:314 Species:Danio rerio


Alignment Length:212 Identity:57/212 - (26%)
Similarity:92/212 - (43%) Gaps:37/212 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 HHHHQHH---PKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTS 260
            ||||.||   .||                   |||...:|||..|:     ....:..||:...|
Zfish    12 HHHHNHHVTGSKH-------------------APLSMASSLQPLQR-----SVDSKHRLDVHTVS 52

  Fly   261 PAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDR 325
            ..::..:..:.    .|....:.:....|..||:|. .|..|::.|.:.||..||:.:|.....|
Zfish    53 DTSSPESVEKE----KGQSKNEDSNDDPSKKKRQRR-QRTHFTSQQLQELEATFQRNRYPDMSTR 112

  Fly   326 RKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTSTPSGDGTPQEAL 390
            .::|...|||:|:|:|||:|||.||| .||..:..:..:....|:..|:.:   |..|..|....
Zfish   113 EEIAVWTNLTEARVRVWFKNRRAKWR-KRERNQQAELCKNGFGPQFNGLMQ---PYDDMYPSYTY 173

  Fly   391 -DYSSDSCSSVDLSEQA 406
             ::::...:|..||.::
Zfish   174 NNWAAKGLTSASLSTKS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 22/52 (42%)
pitx2NP_571050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 25/109 (23%)
Homeobox 86..138 CDD:278475 22/51 (43%)
OAR 272..289 CDD:281777
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 276..289
Nuclear localization signal. /evidence=ECO:0000255 282..286
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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