DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and RAX

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_038463.2 Gene:RAX / 30062 HGNCID:18662 Length:346 Species:Homo sapiens


Alignment Length:191 Identity:52/191 - (27%)
Similarity:75/191 - (39%) Gaps:49/191 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 QQQQRFLG------KTPQQLLDIAPTSPAAAAAATSQNGAHGH----------------GGGNGQ 282
            :::.|.||      |.|::  ...|:.|.|.|.|........:                |...|:
Human    61 KERDRRLGARPACPKAPEE--GSEPSPPPAPAPAPEYEAPRPYCPKEPGEARPSPGLPVGPATGE 123

  Fly   283 GNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRR 347
            ...|.....|:|...:|..|:..|...||..|::..|.....|.:||.::||.:.:|:|||||||
Human   124 AKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRR 188

  Fly   348 MKWRHTRENLK------------SGQEKQPSAV-------PESGGVFKTSTPSGDGTPQEA 389
            .|||. :|.|:            |.....|||.       |.|||     .|:|...|.|:
Human   189 AKWRR-QEKLEVSSMKLQDSPLLSFSRSPPSATLSPLGAGPGSGG-----GPAGGALPLES 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 21/52 (40%)
RAXNP_038463.2 Octapeptide motif 33..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..145 17/85 (20%)
Homeobox 140..192 CDD:278475 21/51 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..318 14/55 (25%)
OAR 319..335 CDD:281777
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 323..336
Nuclear localization signal. /evidence=ECO:0000255 329..333
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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