DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and ceh-9

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001021797.1 Gene:ceh-9 / 267057 WormBaseID:WBGene00000434 Length:147 Species:Caenorhabditis elegans


Alignment Length:80 Identity:36/80 - (45%)
Similarity:50/80 - (62%) Gaps:7/80 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 KRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTREN 356
            |.||..:|..||..|...||.||:.:||::..||.:||.||::|:.|||:||||||.||:     
 Worm    67 KTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWK----- 126

  Fly   357 LKSGQEKQPSA-VPE 370
             |...||:.|. :|:
 Worm   127 -KIESEKERSGEIPD 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 31/59 (53%)
ceh-9NP_001021797.1 Homeodomain 71..127 CDD:459649 28/61 (46%)

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