DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and tlx3b

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_739572.1 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:368 Identity:100/368 - (27%)
Similarity:141/368 - (38%) Gaps:96/368 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 STSP--TSATS--TTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQA 118
            |:||  ||.||  |....:||.:|::|....:||.:.|:.:.|..|  .||           |.|
Zfish     6 SSSPSGTSQTSQPTQHEPISFGIDQILSGTDQESQQNSTRNSSESS--SGS-----------SSA 57

  Fly   119 NAESRRFGHATLPPTFTPTSSHTYPFVGLDKLFPG---PYMDYKSVLRPTPIRAAEHAAP--TYP 178
            :......|        :||.:...|:..|...|.|   ||               |.::|  ...
Zfish    58 SGGCYHLG--------SPTGASATPYTTLTGTFHGIAAPY---------------EESSPYGVNL 99

  Fly   179 TLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQ 243
            |||...::|...|:..                ....|||    .||| :..|.|| |....:..|
Zfish   100 TLAPGGVIRVPAHRPL----------------AAAVPPP----MASA-VPGLGSL-SFPWMESSQ 142

  Fly   244 RFLGKTPQQLLDIAPTSPAAAAAATSQNGAH--GHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQ 306
            ||             .....|||.|....|.  ||...|       .:..|||:  .|..||.:|
Zfish   143 RF-------------AKDRFAAALTPFTVARRIGHPYQN-------RTPPKRKK--PRTSFSRVQ 185

  Fly   307 RKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPS--AVP 369
            ...||.:|.:|||:...:|..||..|.:||||||.||||||.|||......:..:.:|.:  .:.
Zfish   186 ICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRLMIQ 250

  Fly   370 ESGGVFKTSTPSGDGTPQEALDYSSDSCSSV-DLSEQADEDDN 411
            .....|:.|..  |..|.:.|...:.|..:: :|...|.|:.:
Zfish   251 LQHDAFQKSLT--DSVPTDPLCIHNSSLFALQNLQPWASEESS 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/52 (52%)
tlx3bNP_739572.1 Homeobox 177..230 CDD:278475 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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