DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and Gbx1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:390 Identity:92/390 - (23%)
Similarity:142/390 - (36%) Gaps:81/390 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 CPDPVNVDHELP--TKESCASTTIVSTSPTSAT--------------STTKVKLSFSVDRLLGSE 83
            |.:|....|..|  ..|.|.|.......|.||.              |:.....:||:|.|:|..
Mouse    29 CAEPAPRRHLGPRARSEPCVSARGARRGPGSAMQRAAGGGAPGGSGGSSGGPGAAFSIDSLIGPP 93

  Fly    84 PEES-HRQSSSSPSTKSCCDGSILACCSF----PHCFSQANAESRRFGHATLPP-----TFTPTS 138
            |..| |...:..|              .|    |....||.|.:..  .|.|||     :|....
Mouse    94 PPRSGHLLYTGYP--------------MFMPYRPLVLPQALAPAPL--PAGLPPLAPLASFAGRL 142

  Fly   139 SHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAPTY---PTLATNALLRFHQHQKQQHQQHH 200
            |:|: ..||.:..|      ..|...|.:.:.......|   |.||..|.....:...:...:..
Mouse   143 SNTF-CAGLGQAVP------SMVALTTALPSFAEPPDAYYGPPELAAAAASTASRSNPEPAARRT 200

  Fly   201 HHQHHPKHLHQQHK--------PPPHNSTTASALLA--PLHSLTSLQL----------TQQQQRF 245
            ......:.|....:        ||||.|.|..:|.|  .::|....:|          .|:::..
Mouse   201 DGALDAEELLPAREKVTEPPPPPPPHFSETFPSLPAEGKVYSSDEEKLEPPAGDPAGSEQEEEGS 265

  Fly   246 LGKTPQQLLDIAPTSPAAAAAATSQ-NGAHGHGGGNG----QGNASAGSNGKRKRSWSRAVFSNL 305
            .|.:....||.:...|.|......: .|:.|.|...|    .|..:.|...:|:|:    .|::.
Mouse   266 GGDSEDSFLDSSAGGPGALLGPKPKLKGSPGTGAEEGTPVATGVTTPGGKSRRRRT----AFTSE 326

  Fly   306 QRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPE 370
            |...||.:|..:||::..:|.::|..|.|::.|||:||||||.||:..:....|.:..:|...|:
Mouse   327 QLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVSSRSGEPVRNPK 391

  Fly   371  370
            Mouse   392  391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 21/52 (40%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 14/60 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 23/105 (22%)
Homeobox 319..372 CDD:278475 22/56 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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