DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and Alx1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_766141.1 Gene:Alx1 / 216285 MGIID:104621 Length:326 Species:Mus musculus


Alignment Length:103 Identity:43/103 - (41%)
Similarity:57/103 - (55%) Gaps:14/103 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 SNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPD---RRKLAARLNLTDAQVKVWFQNRRMKW 350
            |:.|::|  .|..|::||.:.||..||:..|   ||   |.:||.|..||:|:|:|||||||.||
Mouse   128 SSSKKRR--HRTTFTSLQLEELEKVFQKTHY---PDVYVREQLALRTELTEARVQVWFQNRRAKW 187

  Fly   351 RHTRENLKSGQEKQPSAVPESGGVFKTST-PSGDGTPQ 387
            | .||  :.||.:|  |.......:..|. |..|..||
Mouse   188 R-KRE--RYGQIQQ--AKSHFAATYDISVLPRTDSYPQ 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/55 (49%)
Alx1NP_766141.1 Homeobox 135..189 CDD:395001 29/57 (51%)
Transactivation domain. /evidence=ECO:0000250|UniProtKB:Q63087 192..326 9/31 (29%)
OAR 302..320 CDD:397759
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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