DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and ceh-60

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_509101.4 Gene:ceh-60 / 184803 WormBaseID:WBGene00017690 Length:360 Species:Caenorhabditis elegans


Alignment Length:115 Identity:21/115 - (18%)
Similarity:51/115 - (44%) Gaps:11/115 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 HGGGNGQGNASA---------GSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAAR 331
            |...|.:|.|:.         ...|:::|::.:.....||....:  .:|..|.:..::.:||.:
 Worm   157 HSKNNIRGEAATKILVLRREIEQQGRKRRNFDKNTTDILQNWFHD--HRQNPYPSDQEKAELAKQ 219

  Fly   332 LNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTSTPS 381
            .|:..:||..||.|:|::.:.....::..:.::.:::.......:.|..|
 Worm   220 CNIKISQVNNWFGNQRIRTKQQALRMQEDERERAASMANEAQAIQNSLNS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 13/52 (25%)
ceh-60NP_509101.4 COG5576 138..280 CDD:227863 21/115 (18%)
Homeobox_KN 198..237 CDD:368670 11/40 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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