DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and alr-1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_509860.1 Gene:alr-1 / 181302 WormBaseID:WBGene00044330 Length:362 Species:Caenorhabditis elegans


Alignment Length:177 Identity:52/177 - (29%)
Similarity:69/177 - (38%) Gaps:35/177 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 PLHSLTSLQLTQQQQRFLGKTPQQLLDIA----PTSPAAAAAATSQNGAH--------------- 274
            |||......|.|..:..:.:...||....    |:.|.|.:.|...|..|               
 Worm    22 PLHRPNGADLNQYSKSLMEQLQAQLFANPALQFPSFPPAFSIAALTNNQHELKEDDGKKTPTGDN 86

  Fly   275 ----------GHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPD---RR 326
                      ...|....|..|...|||||:...|..||..|...||..|.:..|   ||   |.
 Worm    87 ILEAASVLDNRENGSPSDGTNSPDDNGKRKQRRYRTTFSAFQLDELEKVFARTHY---PDVFTRE 148

  Fly   327 KLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGG 373
            :||.|:.||:|:|:|||||||.|:|....:......:.|.::|.|.|
 Worm   149 ELATRVQLTEARVQVWFQNRRAKYRKQERSSTHHPYQAPMSIPNSNG 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/55 (47%)
alr-1NP_509860.1 Homeobox 121..174 CDD:365835 26/55 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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