DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and vab-15

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_509648.1 Gene:vab-15 / 181197 WormBaseID:WBGene00006881 Length:225 Species:Caenorhabditis elegans


Alignment Length:190 Identity:51/190 - (26%)
Similarity:81/190 - (42%) Gaps:25/190 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 PKHLHQQHKPPPHNSTTASALLAP-LHSLT---SLQLTQQQQRFLGKTPQQLLDIAPTSPAAAAA 266
            ||...::..|.|...|..:.:|.| ||.:|   ..|| .....:..:|..:|..::..|...:.|
 Worm    23 PKQKCREDLPKPTPITPKTPMLIPGLHPMTPYFGAQL-DPVMIYFAQTGNRLPIVSSDSSPESCA 86

  Fly   267 ATSQNGAHGHGGGNGQGNASAGSNG---------------KRKRSWSRAVFSNLQRKGLEIQFQQ 316
            ::..:..|.....:.|...|..|:.               |..|. .|..||..|...||.:||.
 Worm    87 SSPLSMQHSLQWLSSQREDSPTSDDAKIQIGLSKCMLRKHKNNRK-PRTPFSTQQLISLERKFQS 150

  Fly   317 QKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTR----ENLKSGQEKQPSAVPESG 372
            ::|::..:|.:.:|.|.||:.|||:||||||.|.:..:    |.:|..|....:|....|
 Worm   151 KQYLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQEAEVEKVKFAQASAYAAAAVGG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 24/52 (46%)
vab-15NP_509648.1 Homeobox 132..185 CDD:278475 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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