DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and ceh-24

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_506419.3 Gene:ceh-24 / 179877 WormBaseID:WBGene00000447 Length:299 Species:Caenorhabditis elegans


Alignment Length:235 Identity:62/235 - (26%)
Similarity:91/235 - (38%) Gaps:78/235 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 TASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNAS 286
            :.:::|:||.||..:|             ||||.:|.:............||..:|.|...||..
 Worm    47 SVNSILSPLESLVRVQ-------------QQLLKMAASKSGTPGTNAGVPGAFPYGPGRLPGNYF 98

  Fly   287 AGS------------NG----------------------------------KRKRSWSRAVFSNL 305
            ||.            ||                                  :|||   |.:||..
 Worm    99 AGPFPGYSGAQPNWYNGNDPRFAAAAALLPCSIDPVRSAINHQFSMSSMSQRRKR---RVLFSQA 160

  Fly   306 QRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPE 370
            |...||.:|:|.||:|.|:|.:||..:.||..|||:||||.|.|.:.        |||: .|:..
 Worm   161 QVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKIWFQNHRYKCKR--------QEKE-KAMSG 216

  Fly   371 SGGVFKTSTPSGDGTPQEALDYSSDSCSSVDLSEQADEDD 410
            .|.....|:|..|..       ..|...|:::.::.||::
 Worm   217 LGHSEDGSSPPPDND-------DDDDKYSIEMDDKDDEEE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/52 (50%)
ceh-24NP_506419.3 Homeobox 153..206 CDD:278475 27/55 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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