DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and php-3

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_499573.1 Gene:php-3 / 176640 WormBaseID:WBGene00004024 Length:275 Species:Caenorhabditis elegans


Alignment Length:238 Identity:56/238 - (23%)
Similarity:79/238 - (33%) Gaps:96/238 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 HHHHQHHPKHLHQQHKPPPHNSTTASALLAPL-HSLTSLQLTQQQQRFLG--------------- 247
            |..|...|.....:....|  :||:||..|.: |:..|.:..|.||...|               
 Worm    25 HETHDESPTSPFIKRSDSP--ATTSSAAAAAMQHNFWSTRAAQLQQSVSGSSGVSSGSSSSASNN 87

  Fly   248 -----------------KTPQQLLDIAP-------TSPAAAAAAT-------------------- 268
                             .:||    :||       :.||||||..                    
 Worm    88 LSRTQADNHSERGSDTASSPQ----VAPLPTSSGMSMPAAAAAGMYPFNAGRFPTEFNMMVNQSM 148

  Fly   269 ---------------------------SQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQ 306
                                       |.....|:....||...::.|:..||:   |..::..|
 Worm   149 YNDFYSNSLAASSWPYSYPQQYPFANYSMPSLDGNLNDGGQLEWTSSSHAMRKK---RKPYTKAQ 210

  Fly   307 RKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMK 349
            ...||.:|....|::|..|.:||..|:||:.|||:||||||||
 Worm   211 TLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMK 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 24/52 (46%)
php-3NP_499573.1 Homeobox 202..256 CDD:365835 24/55 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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