DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and NKX6-3

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001351770.1 Gene:NKX6-3 / 157848 HGNCID:26328 Length:265 Species:Homo sapiens


Alignment Length:198 Identity:60/198 - (30%)
Similarity:78/198 - (39%) Gaps:59/198 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 TPQQLLDIAPTSPAAAAAATSQNG---AHGHGGGNGQ--------GNASAGSN------------ 290
            ||..:.||. :.|.||...:..:|   ..|.||.:.|        ||.|...|            
Human    51 TPHGITDIL-SRPVAAPNNSLLSGYPHVAGFGGLSSQGVYYSPQVGNFSKAGNEYPTRTRNCWAD 114

  Fly   291 -------GKR-------------KRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLT 335
                   |::             |:..:|..|:..|...||..|:|.||:..|:|.:||..|.:|
Human   115 TGQDWRGGRQCSNTPDPLSDSIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMT 179

  Fly   336 DAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTSTPSGDGTPQE--------ALDY 392
            ::||||||||||.|||.     ||..|...|.....||.  .:...||..|.|        .||.
Human   180 ESQVKVWFQNRRTKWRK-----KSALEPSSSTPRAPGGA--GAGAGGDRAPSENEDDEYNKPLDP 237

  Fly   393 SSD 395
            .||
Human   238 DSD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 28/72 (39%)
NKX6-3NP_001351770.1 Homeodomain 138..196 CDD:459649 28/57 (49%)

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