DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and AgaP_AGAP006540

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_316578.4 Gene:AgaP_AGAP006540 / 1277139 VectorBaseID:AGAP006540 Length:334 Species:Anopheles gambiae


Alignment Length:75 Identity:21/75 - (28%)
Similarity:32/75 - (42%) Gaps:4/75 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 GGGNGQGNASAG--SNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQV 339
            |..:..|..:.|  .|.|.||  .|..|:..|.:.|:..|.........|..::|:...|:....
Mosquito   145 GTSSDDGCEADGYQKNNKTKR--VRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVT 207

  Fly   340 KVWFQNRRMK 349
            :|||||.|.:
Mosquito   208 QVWFQNSRAR 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 14/52 (27%)
AgaP_AGAP006540XP_316578.4 LIM1_AWH 23..76 CDD:188759
LIM2_AWH 84..138 CDD:188765
Homeobox 167..219 CDD:278475 14/51 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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