DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and LOC11175540

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_061502148.1 Gene:LOC11175540 / 11175540 VectorBaseID:AGAMI1_015109 Length:475 Species:Anopheles gambiae


Alignment Length:471 Identity:95/471 - (20%)
Similarity:143/471 - (30%) Gaps:179/471 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PENLSTHMYGECEVNPTLAKCPD-----PVNVDHELPTKESCASTTIVSTSPTSATSTTKVKLSF 74
            |.:.|.|..|    :|...||..     |..|....|..........:..||.....:..   ||
Mosquito    12 PNSDSDHEEG----HPQTKKCRRQGAWVPAAVSDASPPASQYPDGYCIDMSPAGHPKSLP---SF 69

  Fly    75 SVDRLLGSEPEESHRQSSSSPSTKSCCDGSILAC-CSFPHCFSQANAESRR---FGHATLPPTFT 135
            .::||||..|.|..|.|...   ::...|:..|. ||.|......:..|.|   ...|:|..|.:
Mosquito    70 YIERLLGFGPAERPRHSRDK---RTLSTGTPPASHCSTPPSGGAVSIASERDWCGASASLAATLS 131

  Fly   136 PTSSHTYPFVGLDKLFPGPYM---DYKSVLRPTPIRAA-------EHAAPTYPTLATNALLRFHQ 190
            |..|            |.|..   |.:..|.|.|:.::       :.|||               
Mosquito   132 PIGS------------PLPEEEEDDAEESLEPKPLNSSLSSIVYNQAAAP--------------- 169

  Fly   191 HQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLD 255
                        :||      |...|......|..:..|......:.|.:.|::.:         
Mosquito   170 ------------RHH------QSMQPGRKLVNAVYIAWPEGRTVEVNLNRFQRKMM--------- 207

  Fly   256 IAPTSPAAAAAATSQNGAHGHGGGNGQGNASAG-------------------------------- 288
                             ..|.|||:|.|...||                                
Mosquito   208 -----------------LSGGGGGSGDGADLAGYGQWHPDLGTGVPQFLPERPAHKPSLASKLDF 255

  Fly   289 -------------------SNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNL 334
                               .|.:||   .|..:|.:|.:.||.:||:..|:....|.:||..|.|
Mosquito   256 GSDPYLHLQASTLVKRYRKQNRERK---PRQAYSAMQLERLEDEFQRNIYLNVNKRFELAQCLGL 317

  Fly   335 TDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAV--------PESGG-----------------V 374
            |:.|:|.||||||.|::..:::....:::|.:.:        |:.|.                 |
Mosquito   318 TETQIKTWFQNRRTKFKKQQDSRNKREQRQQAQLIAQWLFQPPQLGSIPLDGQLQPLPRLAALPV 382

  Fly   375 FKTSTPSGDGTPQEAL 390
            .::|.....||.|.||
Mosquito   383 HRSSLALAQGTLQSAL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 25/59 (42%)
LOC11175540XP_061502148.1 None

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