DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and CDX4

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_005184.1 Gene:CDX4 / 1046 HGNCID:1808 Length:284 Species:Homo sapiens


Alignment Length:210 Identity:55/210 - (26%)
Similarity:81/210 - (38%) Gaps:74/210 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 HKPP-------PHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAA------- 263
            :.||       |..|:|...:  |::.:||                        ||||       
Human    76 YSPPREDWSVYPGPSSTMGTV--PVNDVTS------------------------SPAAFCSTDYS 114

  Fly   264 ----AAAATSQNGAHGHGGGN----GQGNASAGSNGKRKRS---WS----------------RAV 301
                ....||.:...|..||:    ..|.|.|.|..:.:.|   |.                |.|
Human   115 NLGPVGGGTSGSSLPGQAGGSLVPTDAGAAKASSPSRSRHSPYAWMRKTVQVTGKTRTKEKYRVV 179

  Fly   302 FSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPS 366
            :::.||..||.:|...:|||...:.:||..|.|::.|||:||||||.|   .|:.:|    |:.|
Human   180 YTDHQRLELEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK---ERKMIK----KKIS 237

  Fly   367 AVPESGGVFKTSTPS 381
            ....|||..::.:.|
Human   238 QFENSGGSVQSDSDS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 26/78 (33%)
CDX4NP_005184.1 Caudal_act 13..170 CDD:461413 23/119 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..155 9/34 (26%)
Homeodomain 175..230 CDD:459649 24/57 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..259 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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