Protein Alignment H2.0 and Hoxa1

DIOPT Version :9

• Sequence 1: NP_523488.2
• Gene: H2.0 / 33841
• FlyBaseID: FBgn0001170
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_037207.2
• Gene: Hoxa1 / 103690132
• RGDID: 11414885
• Length: 334
• Species: Rattus norvegicus
• Alignment Length: 392
• Identity: 94/392 - (23%)
• Similarity: 137/392 - (34%)
• Gaps: 137/392 - (34%)

  Fly    42 DHELPTKESCASTTIVSTSPTSATSTTKVKLSFSVDRLLG-------SEPEESHRQSSSSPSTKS 99
            ||.:.|.:|||         .||.|..      ..||.||       |.....|......|:|
  Rat    31 DHGITTFQSCA---------VSANSCG------GDDRFLGGRGVQITSPHHHHHHHHHPQPAT-- 78

  Fly   100 CCDGSILACCSFPHCFSQANAESRRFGHATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRP 164
                           :..:......:.|::..|::...:            |..||       .|
  Rat    79 ---------------YQTSGNLGVSYSHSSCGPSYGAQN------------FSAPY-------GP 109

  Fly   165 TPIRAAEHAAPTYPTLATNALLRFHQHQKQQHQQHHHHQHH-------PKHLH----QQHKPPPH 218
            ..:......:..||..|.............||  |||||.:       |:::|    |:|:
  Rat   110 YGLNQEADVSGGYPPCAPAVYSGNLSSPMVQH--HHHHQGYAGGTVGSPQYIHHSYGQEHQ---- 168

  Fly   219 NSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAAAAATSQ------------- 270
                :.||....:||:.|..:.|:              |..|||:..::.:|
  Rat   169 ----SLALATYNNSLSPLHASHQE--------------ACRSPASETSSPAQTFDWMKVKRNPPK 215

  Fly   271 NGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLT 335
            .|..|..|..||.||            .|..|:..|...||.:|...||:|:..|.::||.|.|.
  Rat   216 TGKVGEYGYVGQPNA------------VRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLN 268

  Fly   336 DAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTS--TPSG-DGTPQEALDYSSDSC 397
            :.|||:||||||||           |:|:     |..|:...|  ||.| |...:|:.:.||.|.
  Rat   269 ETQVKIWFQNRRMK-----------QKKR-----EKEGLLPISPATPPGSDEKTEESSEKSSSSP 317

  Fly   398 SS 399
            |:
  Rat   318 SA 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
H2.0	NP_523488.2	Homeobox	298..351	CDD:278475	25/52 (48%)
Hoxa1	NP_037207.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	61..82		4/37 (11%)
		Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022	74..202		32/187 (17%)
		COG5576	175..>285	CDD:227863	42/146 (29%)
		Antp-type hexapeptide	203..208		0/4 (0%)
		Homeobox	232..284	CDD:278475	25/62 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	280..334		17/56 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910