Protein Alignment H2.0 and Hoxa3

DIOPT Version :9

• Sequence 1: NP_523488.2
• Gene: H2.0 / 33841
• FlyBaseID: FBgn0001170
• Length: 418
• Species: Drosophila melanogaster
• Sequence 2: NP_001300749.1
• Gene: Hoxa3 / 103690130
• RGDID: 1561431
• Length: 444
• Species: Rattus norvegicus
• Alignment Length: 327
• Identity: 74/327 - (22%)
• Similarity: 109/327 - (33%)
• Gaps: 107/327 - (32%)

  Fly    80 LGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHATLPPTFTPTSSHTYPF 144
            ||::..|.||.:.|..|..|                :.|:.:|.....|.|.....|.|..  |.
  Rat    39 LGTDGVEYHRPACSLQSPAS----------------AGAHPKSHELSEACLRTLSGPPSQP--PG 85

  Fly   145 VGLDKLFPGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQHQKQQHQQHHHHQHHPKHL 209
            :|...|.|.|                ..|||..|
  Rat    86 LGDPPLPPPP----------------PQAAPPAP------------------------------- 103

  Fly   210 HQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAAAAA------- 267
             |..:|||.......|...|..|:               :|.|..:..|| ||:.|.:
  Rat   104 -QPPQPPPQPPAPTPAAPPPPSSV---------------SPPQSANSNPT-PASTAKSPLLNSPT 151

  Fly   268 ----------TSQNGAHGHGGGNGQGNASAGSN---GKRKRSWSRAVFSNLQRKGLEIQFQQQKY 319
                      .|:........|:..|.:.||..   |:.....:|..:::.|...||.:|...:|
  Rat   152 VGKQIFPWMKESRQNTKQKTSGSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRY 216

  Fly   320 ITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRE-----NLKSGQEKQPSAVPESGGVFKTST 379
            :.:|.|.::|..||||:.|:|:||||||||::..::     ....||....|.||...|.:..|.
  Rat   217 LCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGYLNSM 281

  Fly   380 PS 381
            .|
  Rat   282 HS 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
H2.0	NP_523488.2	Homeobox	298..351	CDD:278475	23/52 (44%)
Hoxa3	NP_001300749.1	COG5576	<182..309	CDD:227863	33/102 (32%)
		Homeobox	196..249	CDD:395001	23/52 (44%)
		DUF4074	379..442	CDD:404218

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910