DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and prop1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_004914810.1 Gene:prop1 / 101734397 XenbaseID:XB-GENE-22068967 Length:242 Species:Xenopus tropicalis


Alignment Length:134 Identity:42/134 - (31%)
Similarity:56/134 - (41%) Gaps:37/134 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 ASAGSNG---------------KRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPD---RRKLAAR 331
            :||.:||               .|:|  .|..||..|.:.||..|.:..|   ||   |.:||..
 Frog    43 SSAEANGLLSTSRHMPPHYPTPTRRR--HRTTFSQEQLEHLETAFSKNHY---PDIYCREELAKI 102

  Fly   332 LNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPES--------GGVFKTSTPSGDGTPQE 388
            ..|.:|:::|||||||.|.|      |..:..|.|.||.|        .|:...|.||.......
 Frog   103 TKLNEARIQVWFQNRRAKHR------KHERTTQKSTVPSSMLTCGSLMSGMCSMSPPSRQYQYPH 161

  Fly   389 ALDY 392
            ||::
 Frog   162 ALNH 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 23/55 (42%)
prop1XP_004914810.1 Homeobox 73..123 CDD:365835 23/58 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.