DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and mnx1

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_002935225.2 Gene:mnx1 / 100496534 XenbaseID:XB-GENE-919890 Length:338 Species:Xenopus tropicalis


Alignment Length:387 Identity:100/387 - (25%)
Similarity:139/387 - (35%) Gaps:133/387 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHATLPPTFTPT 137
            :|.:|.||..:|.    :|.:||          ||..:.....|.:|:.|....|.....|.||:
 Frog     6 NFRIDALLAIDPP----KSQTSP----------LALVTSLSSSSLSNSGSPPSEHTDSLRTDTPS 56

  Fly   138 --------------SSHTYPF------------VGLDKLFPGPYMDYKSVLRPTPIRAAEHAAPT 176
                          |||.:|.            :....|:..|...|.:.   ..:.|.:|.|.:
 Frog    57 PPRTCGLVPKPGFLSSHQHPINMMALHPQAAPGIPPQALYGHPMYSYSAA---AALAAGQHPALS 118

  Fly   177 YPTLATNALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLH-SLTSLQLTQ 240
            ||               ....|..||.|||                    :.|:. |..:.||.|
 Frog   119 YP---------------YPQMQGAHHAHHP--------------------VDPIKISAGTFQLDQ 148

  Fly   241 QQQRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSN--GKRKRSWSRAVFS 303
            ..:   ..|...:|      |..|                 ..|:.|.||  ||.:|  .|..|:
 Frog   149 WLR---ASTAGMML------PKMA-----------------DFNSQAQSNLLGKCRR--PRTAFT 185

  Fly   304 NLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHT---RENLKSGQEKQP 365
            :.|...||.||:..||:::|.|.::|..|.||:.|||:|||||||||:.:   :|......|||.
 Frog   186 SQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAVQDAEKQQ 250

  Fly   366 SA--------VPESGGVFKTS---TPSGD---GTPQEALDYSSDSCSSVDLSEQADEDDNIE 413
            .|        .||.....|.|   .|.||   |..:...|||       |..|:.||:|..|
 Frog   251 RAGKGSCEEKCPEELQEDKNSYHLHPRGDPIKGNSRLVRDYS-------DSEEEEDEEDREE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 26/52 (50%)
mnx1XP_002935225.2 Homeobox 180..234 CDD:395001 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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