DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and barhl1

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_004916717.1 Gene:barhl1 / 100491447 XenbaseID:XB-GENE-853661 Length:327 Species:Xenopus tropicalis


Alignment Length:167 Identity:50/167 - (29%)
Similarity:68/167 - (40%) Gaps:41/167 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 ALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDI-APTSPAAAAAATSQNGAHGH------------ 276
            ||....|....:||:...|.....:...:.|| |...|.|..|..|.||...|            
 Frog    69 ALAMESHLQPGVQLSAPSQSRTVTSSFLIRDILADCKPLATCAPYSSNGQPTHDLAHCLASKAAD 133

  Fly   277 --------------------GGGNGQGNASAGSNG-------KRKRSWSRAVFSNLQRKGLEIQF 314
                                |....:|:....|:.       |:.|. :|..|::.|...||..|
 Frog   134 DFRDKLDKSSSSTSSESEYKGKVKEEGDREISSSRDSPPVRLKKPRK-ARTAFTDHQLAQLERSF 197

  Fly   315 QQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWR 351
            ::|||::..||.:|||.|||||.|||.|:||||.||:
 Frog   198 ERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 31/60 (52%)
barhl1XP_004916717.1 Homeodomain 179..235 CDD:459649 30/57 (53%)

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