DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and zfhx3b

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001352117.1 Gene:zfhx3b / 100333211 ZFINID:ZDB-GENE-030131-7577 Length:3838 Species:Danio rerio


Alignment Length:493 Identity:104/493 - (21%)
Similarity:161/493 - (32%) Gaps:163/493 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LLHE----SAASMEQSMPENLSTHMYGECEVNPTLAKCPDPVNVDHELPTKESCASTTIVST--- 59
            |.||    |.:|.:..||.:.|.              ||.|          .|.|.:.|.|:   
Zfish  2510 LSHEYYTPSGSSGQTPMPSSSSL--------------CPLP----------PSSAFSHIASSEKE 2550

  Fly    60 --SPTSATSTTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAES 122
              :|.:.:::...|...|.:..||...:.|.:|.:|.||..                 .|...:.
Zfish  2551 EPTPANTSNSFDEKSRHSAETTLGQREQTSLKQETSHPSET-----------------PQQRPQR 2598

  Fly   123 RRFGHATLPPTFTPTSSHTYPFVGLDKLFPGPYMDYKS--------VLRPTPIRAAEH--AAPTY 177
            ....||.  |..:..||   |.:...:...||.:.:.|        .|.|....|::.  |....
Zfish  2599 EEKMHAV--PKNSKLSS---PSLSQQQQHSGPSVSHTSQTSQSSHMALNPHLASASQQQLAQQMI 2658

  Fly   178 PTLATNALLRFHQHQK-QQHQQHHHHQHHPKHLHQQ--HKP--------PPHNSTTASALLAPLH 231
            |.......|.|...:. |:|||.|......:.:|.|  .:|        .|.|...||.|||   
Zfish  2659 PYQCEQCKLAFPSFEHWQEHQQLHFLSVQNQFIHPQFLDRPMDMSFMLFDPSNPLLASQLLA--- 2720

  Fly   232 SLTSLQLTQQQQRFLGKTPQQLLDIA--PTSPAAAAAATSQNGAHGHGGGNGQGNA-SAGSNGKR 293
                           |..||...:.|  |::|.:...:..:......|...|:.:: ::|...:|
Zfish  2721 ---------------GAIPQMSSNSATSPSTPTSTMNSLKRKLEEKAGTSPGESDSMNSGEEPQR 2770

  Fly   294 KRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKL---AARLNLTDAQVKVWFQNRRMKWRHTRE 355
                .:.:.:.:..:.|||.:|:....:.|.|:.|   |..:.|....|:|||||       ||.
Zfish  2771 ----DKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQN-------TRA 2824

  Fly   356 NLKSGQEKQ--PSAV----PESGGVFKTSTP----------------------SGDGTPQEALDY 392
            ..:.||.:.  |:..    |....:||..|.                      ||....|||:..
Zfish  2825 RERKGQFRAVGPAQAHRRCPFCRALFKAKTALEAHIRSRHWHEAKRAGYNLALSGLLPEQEAMQL 2889

  Fly   393 SSD-----------------SCSS-------VDLSEQA 406
            ..|                 .|||       :|||.:|
Zfish  2890 KMDPLDISSYAHLAQSNNDAQCSSLSPISKVMDLSPRA 2927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 15/55 (27%)
zfhx3bNP_001352117.1 C2H2 Zn finger 734..755 CDD:275368
C2H2 Zn finger 765..802 CDD:275368
C2H2 Zn finger 820..837 CDD:275368
PHA00732 1339..>1391 CDD:177300
C2H2 Zn finger 1489..1509 CDD:275368
C2H2 Zn finger 1527..1552 CDD:275368
C2H2 Zn finger 1555..1574 CDD:275368
SFP1 <1610..1739 CDD:227516
C2H2 Zn finger 1672..1696 CDD:275368
C2H2 Zn finger 1723..1741 CDD:275368
HOX 2283..2339 CDD:197696
Homeobox 2383..2436 CDD:306543
Abdominal-A 2723..2868 CDD:332641 33/155 (21%)
Homeobox 2775..2827 CDD:306543 17/58 (29%)
Abdominal-A 3031..>3137 CDD:332641
Homeobox 3073..3125 CDD:306543
Herpes_BLLF1 <3228..>3401 CDD:330317
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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