DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and bsx

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001095280.1 Gene:bsx / 100124316 XenbaseID:XB-GENE-995770 Length:229 Species:Xenopus tropicalis


Alignment Length:291 Identity:72/291 - (24%)
Similarity:114/291 - (39%) Gaps:103/291 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 PPTFTPTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAPTYPTLATNALLRFHQHQKQQ 195
            |.....:|:|...|..     ..|.:||...|.|||                 .:|..|.|    
 Frog    29 PKPLRESSTHFSSFTS-----RVPILDYGYPLMPTP-----------------TILAPHPH---- 67

  Fly   196 HQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTS 260
            |..|....|||..|.....|.|        .|.|.||               :.|          
 Frog    68 HPLHKPDHHHPFFLATSGLPVP--------ALFPHHS---------------ELP---------- 99

  Fly   261 PAAAAAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDR 325
                                       |.:.:|::  :|.|||:.|..|||.:|:.|:|::.|:|
 Frog   100 ---------------------------GKHCRRRK--ARTVFSDSQLSGLEKRFELQRYLSTPER 135

  Fly   326 RKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTS-TPSGD--GTPQ 387
            .:||..|:|::.|||.||||||||  | ::.|:..|:...:|:.::.....:| |.|||  ||  
 Frog   136 VELATALSLSETQVKTWFQNRRMK--H-KKQLRKTQDDPKTAMSDNHLDHSSSETESGDPNGT-- 195

  Fly   388 EALDYSSDSCSSVDLSEQADEDDNIEINVVE 418
               :.:.....::.|.::|::    |::::|
 Frog   196 ---ERAKGGSQNLFLRDEAED----EVDIIE 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 29/59 (49%)
bsxNP_001095280.1 Homeodomain 106..162 CDD:459649 29/60 (48%)

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