DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and ventx1

DIOPT Version :10

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001107707.1 Gene:ventx1 / 100101668 XenbaseID:XB-GENE-920501 Length:277 Species:Xenopus tropicalis


Alignment Length:159 Identity:48/159 - (30%)
Similarity:68/159 - (42%) Gaps:56/159 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 QRFLGKTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGS------------------ 289
            |..|||...:|...:|:|     ||..:|      .|:....:||||                  
 Frog    64 QSSLGKHGDKLHYSSPSS-----AALHRN------WGSSDEFSSAGSEDDSTDGFPSPVRNSQET 117

  Fly   290 ----NGKRKRSWSRAVFSNLQRK----------GLEIQFQQQKYITKPDRRKLAARLNLTDAQVK 340
                .||..:       |:|||:          .||..|.:|:|:...:|:|||..|.|::.|||
 Frog   118 ETDCRGKSPK-------SDLQRRLRTAFTPQISRLEQAFNKQRYLGASERKKLATSLRLSEIQVK 175

  Fly   341 VWFQNRRMKWRHTRENLKSGQEKQPSAVP 369
            .||||||||.:      :..|::|.|.||
 Frog   176 TWFQNRRMKLK------RQIQDQQHSMVP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeodomain 292..352 CDD:459649 27/69 (39%)
ventx1NP_001107707.1 Homeodomain 132..187 CDD:459649 23/60 (38%)

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