DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment H2.0 and not

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001164669.1 Gene:not / 100038059 XenbaseID:XB-GENE-478518 Length:236 Species:Xenopus tropicalis


Alignment Length:347 Identity:71/347 - (20%)
Similarity:115/347 - (33%) Gaps:142/347 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRFGHATLPPTFT 135
            |.||::|.:|........:.|...||.:.....|:      |:          |:.:..:|    
 Frog    31 KASFNIDSILSRADRPVPKVSMEMPSWQPPSPPSV------PY----------RYSYGMMP---- 75

  Fly   136 PTSSHTYPFVGLDKLFPGPYMDYKSVLRPTPIRAAEHAAP-TYPTLATNALLRFHQHQKQQHQQH 199
                  ||.|.|.|    |.:.|.|:.:..|:|......| ..|......||             
 Frog    76 ------YPPVWLIK----PTVGYPSMAQQQPMRMPRGECPCPDPACKERGLL------------- 117

  Fly   200 HHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLGKTPQQLLDIAPTSPAAA 264
              :.|.|                                                          
 Frog   118 --YSHCP---------------------------------------------------------- 122

  Fly   265 AAATSQNGAHGHGGGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLA 329
                           ||..|..:...|..|....|.||:..|.:.||.:|.:|:|:...:|..||
 Frog   123 ---------------NGSMNPLSWRTGPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLA 172

  Fly   330 ARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTSTPSGDGTPQEALDYSS 394
            :.||||:.||||||||||:|||      |...|::.:.:.:.|.:           |.::.|::.
 Frog   173 STLNLTETQVKVWFQNRRIKWR------KQSLEQKKAKLSQFGVI-----------PADSSDHTD 220

  Fly   395 DSCSSVDLSEQADEDDNIEINV 416
            ||      .|..:::|::::.:
 Frog   221 DS------RETEEDEDDVDVEL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 27/52 (52%)
notNP_001164669.1 Homeobox 142..194 CDD:278475 27/51 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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