DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9098 and sh2d3ca

DIOPT Version :10

Sequence 1:NP_608979.2 Gene:CG9098 / 33840 FlyBaseID:FBgn0031762 Length:944 Species:Drosophila melanogaster
Sequence 2:XP_005155664.3 Gene:sh2d3ca / 558860 ZFINID:ZDB-GENE-080102-1 Length:930 Species:Danio rerio


Alignment Length:770 Identity:231/770 - (30%)
Similarity:353/770 - (45%) Gaps:155/770 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SPSEQQEAIALKKALEWELSLDARELRSHAWYHGALPRQRAEEIVQREGDFLVRDCASQPDNYVL 274
            ||.|:     |:|.||.||.|.:.::|||.||||.:||:.:|.:|.|.|||||||..|...:|||
Zfish   264 SPPEK-----LRKELEEELKLSSSDMRSHGWYHGHIPREASETLVLRSGDFLVRDSLSTVGDYVL 323

  Fly   275 SCRSKAAVLHFVLNK-LVLQPETVYERVQYQFEEDAFDTVPDLITFYVGSGKPISSASGALIQFP 338
            :||.:..|:|..::| ||...:|   ::||..|.::||:||.|:..:.|:|:.:...:||.:..|
Zfish   324 TCRWQQEVIHCRISKVLVKSGQT---KIQYMLENESFDSVPTLVRHHAGTGRAVCPRTGAQLLCP 385

  Fly   339 CNRTYPLSFYGHKIVGNQLHTQMLAGLRGLSPLNSPMGSNGA--------VGAGMNATFRFEPQQ 395
            .|||.||.:..        .|..|||.|..|.. ||....||        :..|: .|.:..|..
Zfish   386 VNRTLPLRYLE--------ATFALAGGRPGSAY-SPSAQRGAHIKRRSVTMTDGL-TTEKIIPHS 440

  Fly   396 QQQQQLSPMAGSPASPHCSPPRARREVPPPPRLPCKKQQRSQSLTPAQAMLVSNINKLQEQQLQM 460
            ..|         |..|. .|.....||.|.....|......:......||   :::::||.:..:
Zfish   441 VAQ---------PTQPD-EPQTVEPEVKPAEGNSCPSTVHHKDAMRNCAM---SMDQIQEYRCPL 492

  Fly   461 QEL---------------ENGNGNGIMRFQTIARCNP----TSEQHLESKFTTHSLP----RPNT 502
            ..:               .:|:|..::   .:...:|    :|:.||....:.:::|    .|:|
Zfish   493 SPVGETPQSPAYSAISRHRHGSGGRVL---AVIPPSPVMRRSSDPHLSPSSSNNNIPCSETGPST 554

  Fly   503 --SAAHALRQQAVARISSLARNCSLDSPSDSRP---PSPPPKPRKEPMAAVLAYQASGSDSGNGS 562
              :.||..:.:::.:..|.   |.|      ||   |.||.|...|.:..     ..|...|:|:
Zfish   555 YSTPAHGYQSESLEQGGSY---CEL------RPGQAPIPPCKSYVERLKV-----EEGQSLGSGA 605

  Fly   563 GDSALGDACEASVQRGVIIKNPRFMTTSVSNGTLKSFTEFDVLAAEEELFTMAIEEVKTASKFDF 627
            .|...|                 ||                            :..|:|:|.|..
Zfish   606 PDGVEG-----------------FM----------------------------LPLVETSSSFKP 625

  Fly   628 ENFVTLLLPSVENKPLDGDALNTFKMMLLETGPKLLAEHITRID--IALFLEEPSNEEDYYLSCS 690
            ..:.:.|||. |||||:...|...|.:|.|..||..|:|||:.|  :|..|......:......|
Zfish   626 GKYQSTLLPP-ENKPLEMSVLKRVKELLAEVDPKTAAKHITKADCTVARILGVTKEMQRMMGVSS 689

  Fly   691 GLELLTLPHGKVFREDIIERTQCIKLMVAVTILTC--QTDLDRAQLLSKWIQIAVETKTALGNLF 753
            |||.||||||...|.|::||...:.:|:||.:|.|  .|: :||.||.|.||:|.|.|:.:||::
Zfish   690 GLEQLTLPHGHQLRLDLLERFYTMSIMMAVDLLGCTGSTE-ERAALLHKTIQLAAELKSNMGNMY 753

  Fly   754 GFCAIMLGLCMQQIQKLDQAWHILRQQYTDSAFTFEAKLRPTLSIMNEASNP-QAPNTTVPHVLL 817
            ||.|:|..|.:.||.:|:|.|..|||::|:.|..:|.||:|.|..||:.... ...:|..|||: 
Zfish   754 GFAAVMRALELPQISRLEQTWMTLRQRHTEGAILYEKKLKPFLKAMNDGKETCVLSSTCFPHVV- 817

  Fly   818 YALLIDRPVMDIINHSNIDDRPALYHTCIAPWESKADDFGMTINFQHLDASRGFLKNLELYRKNA 882
                   ||:.::      :|.......:..|||.  :.|:.:...||:|:|....:..|||.||
Zfish   818 -------PVLSLL------ERSVAAGEALESWESV--ESGVDVVMSHLEAARTIAHHGGLYRTNA 867

  Fly   883 KIILEDASPRLDELLADAFRTEFHVKFLWGSSGATAKAEDRHNKLEKVLTLMADK 937
            :..|:|...|.:.|  :.|.|||.::.||||.|:.....:|:.|.:||||.::.|
Zfish   868 ESKLQDFQERKEVL--EIFCTEFQMRLLWGSRGSEGSQTERYEKFDKVLTALSHK 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9098NP_608979.2 SAM_1 42..102 CDD:425739
SH2_BCAR3 233..367 CDD:198200 53/134 (40%)
RasGEF 660..>797 CDD:470590 60/140 (43%)
sh2d3caXP_005155664.3 None
Blue background indicates that the domain is not in the aligned region.

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