DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9098 and sh2d3ca

DIOPT Version :9

Sequence 1:NP_608979.2 Gene:CG9098 / 33840 FlyBaseID:FBgn0031762 Length:944 Species:Drosophila melanogaster
Sequence 2:XP_005155664.2 Gene:sh2d3ca / 558860 ZFINID:ZDB-GENE-080102-1 Length:930 Species:Danio rerio


Alignment Length:763 Identity:230/763 - (30%)
Similarity:353/763 - (46%) Gaps:141/763 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SPSEQQEAIALKKALEWELSLDARELRSHAWYHGALPRQRAEEIVQREGDFLVRDCASQPDNYVL 274
            ||.|:     |:|.||.||.|.:.::|||.||||.:||:.:|.:|.|.|||||||..|...:|||
Zfish   264 SPPEK-----LRKELEEELKLSSSDMRSHGWYHGHIPREASETLVLRSGDFLVRDSLSTVGDYVL 323

  Fly   275 SCRSKAAVLHFVLNK-LVLQPETVYERVQYQFEEDAFDTVPDLITFYVGSGKPISSASGALIQFP 338
            :||.:..|:|..::| ||...:|   ::||..|.::||:||.|:..:.|:|:.:...:||.:..|
Zfish   324 TCRWQQEVIHCRISKVLVKSGQT---KIQYMLENESFDSVPTLVRHHAGTGRAVCPRTGAQLLCP 385

  Fly   339 CNRTYPLSFYGHKIVGNQLHTQMLAGLRGLSPLNSPMGSNGAVGAGMNATFRFEPQQQQQQQLSP 403
            .|||.||.:..        .|..|||.|..|.. ||....||.....:.|.   ......:::.|
Zfish   386 VNRTLPLRYLE--------ATFALAGGRPGSAY-SPSAQRGAHIKRRSVTM---TDGLTTEKIIP 438

  Fly   404 -MAGSPASPHCSPPRARREVPPPPRLPCKKQQRSQSLTPAQAMLVSNINKLQEQQLQMQEL---- 463
             .|..|..|. .|.....||.|.....|......:......||   :::::||.:..:..:    
Zfish   439 HSAAQPTQPD-EPQTVEPEVKPAEGNSCPSTVHHKDAMRNCAM---SMDQIQEYRCPLSPVGETP 499

  Fly   464 -----------ENGNGNGIMRFQTIARCNP----TSEQHLESKFTTHSLP----RPNT--SAAHA 507
                       .:|:|..::   .:...:|    :|:.||....:.:::|    .|:|  :.||.
Zfish   500 QSPAYSAISRHRHGSGGRVL---AVIPPSPVMRRSSDPHLSPSSSNNNIPCSETGPSTYSTPAHG 561

  Fly   508 LRQQAVARISSLARNCSLDSPSDSRP---PSPPPKPRKEPMAAVLAYQASGSDSGNGSGDSALGD 569
            .:.:::.:..|.   |.|      ||   |.||.|...|.:..     ..|...|:|:.|...| 
Zfish   562 YQSESLEQGGSY---CEL------RPGQAPIPPCKSYVERLKV-----EEGQSLGSGAPDGVEG- 611

  Fly   570 ACEASVQRGVIIKNPRFMTTSVSNGTLKSFTEFDVLAAEEELFTMAIEEVKTASKFDFENFVTLL 634
                            ||                            :..|:|:|.|....:.:.|
Zfish   612 ----------------FM----------------------------LPLVETSSSFKPGKYQSTL 632

  Fly   635 LPSVENKPLDGDALNTFKMMLLETGPKLLAEHITRID--IALFLEEPSNEEDYYLSCSGLELLTL 697
            ||. |||||:...|...|.:|.|..||..|:|||:.|  :|..|......:......||||.|||
Zfish   633 LPP-ENKPLEMSVLKRVKELLAEVDPKTAAKHITKADCTVARILGVTKEMQRMMGVSSGLEQLTL 696

  Fly   698 PHGKVFREDIIERTQCIKLMVAVTILTC--QTDLDRAQLLSKWIQIAVETKTALGNLFGFCAIML 760
            |||...|.|::||...:.:|:||.:|.|  .|: :||.||.|.||:|.|.|:.:||::||.|:|.
Zfish   697 PHGHQLRLDLLERFYTMSIMMAVDLLGCTGSTE-ERAALLHKTIQLAAELKSNMGNMYGFAAVMR 760

  Fly   761 GLCMQQIQKLDQAWHILRQQYTDSAFTFEAKLRPTLSIMNEASNP-QAPNTTVPHVLLYALLIDR 824
            .|.:.||.:|:|.|..|||::|:.|..:|.||:|.|..||:.... ...:|..|||:        
Zfish   761 ALELPQISRLEQTWMTLRQRHTEGAILYEKKLKPFLKAMNDGKETCVLSSTCFPHVV-------- 817

  Fly   825 PVMDIINHSNIDDRPALYHTCIAPWESKADDFGMTINFQHLDASRGFLKNLELYRKNAKIILEDA 889
            ||:.::      :|.......:..|||.  :.|:.:...||:|:|....:..|||.||:..|:|.
Zfish   818 PVLSLL------ERSVAAGEALESWESV--ESGVDVVMSHLEAARTIAHHGGLYRTNAESKLQDF 874

  Fly   890 SPRLDELLADAFRTEFHVKFLWGSSGATAKAEDRHNKLEKVLTLMADK 937
            ..|.:.|  :.|.|||.::.||||.|:.....:|:.|.:||||.::.|
Zfish   875 QERKEVL--EIFCTEFQMRLLWGSRGSEGSQTERYEKFDKVLTALSHK 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9098NP_608979.2 SAM_1 43..102 CDD:278937
SAM 47..103 CDD:197735
SH2_BCAR3 233..367 CDD:198200 53/134 (40%)
RasGEF 660..>797 CDD:295324 60/140 (43%)
sh2d3caXP_005155664.2 SH2_BCAR3 283..415 CDD:198200 57/143 (40%)
RasGEF 655..925 CDD:295324 103/285 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596311
Domainoid 1 1.000 119 1.000 Domainoid score I5756
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I2613
OMA 1 1.010 - - QHG49555
OrthoDB 1 1.010 - - D138275at2759
OrthoFinder 1 1.000 - - FOG0003062
OrthoInspector 1 1.000 - - otm25757
orthoMCL 1 0.900 - - OOG6_108941
Panther 1 1.100 - - O PTHR14247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8122
SonicParanoid 1 1.000 - - X2423
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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