DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gal and BGAL4

DIOPT Version :9

Sequence 1:NP_608978.2 Gene:Gal / 33839 FlyBaseID:FBgn0001089 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_200498.1 Gene:BGAL4 / 835789 AraportID:AT5G56870 Length:724 Species:Arabidopsis thaliana


Alignment Length:766 Identity:191/766 - (24%)
Similarity:305/766 - (39%) Gaps:210/766 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CLIIAVMALTVGLCVGLSGDTDAPEEQPRFTIDHEANTFMLDGQPFRYVSGSFHYFRAVPESWRS 81
            |:.:|::.     |:.||....|       ::.::....:::||....:|||.||.|:.||.|..
plant    10 CIFLAILC-----CLSLSCIVKA-------SVSYDRKAVIINGQRRILLSGSIHYPRSTPEMWPG 62

  Fly    82 RLRTMRASGLNALDTYVEWSLHNPHDGEYNWEGIADVVKFLEIAQEEDFYIILRPGPYICAERDN 146
            .::..:..||:.::|||.|:.|.|..|:|.:....|:|||:::..:...|:.||.|||:|||.:.
plant    63 LIQKAKEGGLDVIETYVFWNGHEPSPGQYYFGDRYDLVKFIKLVHQAGLYVNLRIGPYVCAEWNF 127

  Fly   147 GGLPHWLFTKY-PSIKMRTNDPNYISEVGKWYAEL--MPRLQHLFVGNGGKIIMVQVENEYGDY- 207
            ||.|.||  |: |.:..||::..:.:.:.|:..::  |.:.:.||...||.||:.|:|||||.. 
plant   128 GGFPVWL--KFVPGMAFRTDNEPFKAAMKKFTEKIVWMMKAEKLFQTQGGPIILAQIENEYGPVE 190

  Fly   208 ----ACDHDYLNWLRDETEKYVSGKALLFTVDIP----NEKMSCGKIE---NVFATTDFGIDRIN 261
                |....|..|        |:..||..:..:|    .::.:.|.|.   |.:...||..:.||
plant   191 WEIGAPGKAYTKW--------VAQMALGLSTGVPWIMCKQEDAPGPIIDTCNGYYCEDFKPNSIN 247

  Fly   262 EIDKIWAMLRALQPTGPLVNSEFYPGWLTHWQEQNQRRDGQEVANALRTILSYNAS-VNLYMFFG 325
            : .|:|              :|.:.||.|.:......|..:::|.::...:....| ||.||:.|
plant   248 K-PKMW--------------TENWTGWYTDFGGAVPYRPVEDIAYSVARFIQKGGSLVNYYMYHG 297

  Fly   326 GTNFGFTAGANYNLDGGIGYAADITSYDYDAVMDEAG-GVTTKYNLVKAVIGEFLPLPE------ 383
            ||||..|||.         :.|  :||||||.:||.| ....||:.:|| :.:.:.|.|      
plant   298 GTNFDRTAGE---------FMA--SSYDYDAPLDEYGLPREPKYSHLKA-LHKAIKLSEPALLSA 350

  Fly   384 ---ITLNPAKRLAY--------------------GRV---------------------------- 397
               :|...||:.||                    .||                            
plant   351 DATVTSLGAKQEAYVFWSKSSCAAFLSNKDENSAARVLFRGFPYDLPPWSVSILPDCKTEVYNTA 415

  Fly   398 ------------------------ELTPKLTLLSTEGRAALSKGDPVESIKPKTFEELDLY---- 434
                                    |.||......|..|..|     ||.|. .|:::.|.:    
plant   416 KVNAPSVHRNMVPTGTKFSWGSFNEATPTANEAGTFARNGL-----VEQIS-MTWDKSDYFWYIT 474

  Fly   435 -----SGLVLYETELPSMDLDPALLKIDQINDRAHVFVDQELVGT----LSREAQIYSLPLSKGW 490
                 ||....:|.      |..||.:.......||||:.:|.||    |......:|..:....
plant   475 DITIGSGETFLKTG------DSPLLTVMSAGHALHVFVNGQLSGTAYGGLDHPKLTFSQKIKLHA 533

  Fly   491 G-STLQLLVENQG--RVNFYISNDTKGIFGEVSLQLHNGGYLPLENWR-STAFPLEQSAVELWRR 551
            | :.:.||....|  .|..:.....||:.|.|:|:..|.|...:..|: |....::..|:.|   
plant   534 GVNKIALLSVAVGLPNVGTHFEQWNKGVLGPVTLKGVNSGTWDMSKWKWSYKIGVKGEALSL--- 595

  Fly   552 EHTDEKALDPLLAR-QRILRNGPILYTGSLTVTEVGD--TYLNMAGWGKGVAYVNGFNLGRYWPV 613
             ||:.::......: ..:.:..|:.:..|...|..|:  ..|:|...|||..::||.|:||:||.
plant   596 -HTNTESSGVRWTQGSFVAKKQPLTWYKSTFATPAGNEPLALDMNTMGKGQVWINGRNIGRHWPA 659

  Fly   614 ------------AG--------------PQVTLYVPNEILKVGENSLVILE 638
                        ||              .|...:||...|| .:|.:|:.|
plant   660 YKAQGSCGRCNYAGTFDAKKCLSNCGEASQRWYHVPRSWLK-SQNLIVVFE 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalNP_608978.2 Glyco_hydro_35 54..376 CDD:279624 106/338 (31%)
BetaGal_dom4_5 <570..637 CDD:290101 25/94 (27%)
BGAL4NP_200498.1 PLN03059 5..724 CDD:166698 191/766 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1874
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D179316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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