DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gal and Ect3

DIOPT Version :10

Sequence 1:NP_608978.2 Gene:Gal / 33839 FlyBaseID:FBgn0001089 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_650142.1 Gene:Ect3 / 41457 FlyBaseID:FBgn0260746 Length:637 Species:Drosophila melanogaster


Alignment Length:639 Identity:329/639 - (51%)
Similarity:420/639 - (65%) Gaps:25/639 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MALTVGLCVGLSGDTDAPEEQPRFTIDHEANTFMLDGQPFRYVSGSFHYFRAVPESWRSRLRTMR 87
            |..:|.:.|.|.....|......|.:|:|.:.|:.||:|||:::||||||||.|.:|:..|||||
  Fly     1 MKFSVVVLVALLPLLGAVSANRTFVVDYEKDQFLKDGEPFRFIAGSFHYFRAHPATWQRHLRTMR 65

  Fly    88 ASGLNALDTYVEWSLHNPHDGEYNWEGIADVVKFLEIAQEEDFYIILRPGPYICAERDNGGLPHW 152
            |:||||:.||||||||||.||.|.|.||||:..|:.:|..||..:|||||||||||||.||.|:|
  Fly    66 AAGLNAVTTYVEWSLHNPRDGVYVWSGIADLEHFIRLAVGEDLLVILRPGPYICAERDMGGFPYW 130

  Fly   153 LFTKYPSIKMRTNDPNYISEVGKWYAELMPRLQHLFVGNGGKIIMVQVENEYGD-YACDHDYLNW 216
            |..|||.|::||.|.||:||:..||.:|..::.....||||.|||||||||||. ||||.:|.||
  Fly   131 LLNKYPGIQLRTADVNYLSEIRIWYTQLFAKMNKYLYGNGGPIIMVQVENEYGSFYACDLNYRNW 195

  Fly   217 LRDETEKYVSGKALLFTVDIPNEKMSCGKIENVFATTDFGIDRINEIDKIWAMLRALQPTGPLVN 281
            ||||||.:|.|:|:|||.|.|: .:.||||:.|.||.|||  ..|::..|||..|..||.|||||
  Fly   196 LRDETESHVKGQAVLFTNDGPS-VLRCGKIQGVLATMDFG--ATNDLKPIWAKFRRYQPKGPLVN 257

  Fly   282 SEFYPGWLTHWQEQNQRRDGQEVANALRTILSYNASVNLYMFFGGTNFGFTAGANYNLDGGIG-Y 345
            :|:||||||||.|.......|.:.:....:|.:.||||.|||:||||||||||||   |.|.| |
  Fly   258 AEYYPGWLTHWTEPMANVSTQSITSTFINMLDHGASVNFYMFYGGTNFGFTAGAN---DIGPGNY 319

  Fly   346 AADITSYDYDAVMDEAGGVTTKYNLVKAVIGEFLPLPEITL-NPAKRLAYGRVELTPKLTLLSTE 409
            .||||||||||.|.|||..|.||..::.:||.:||||...: .|..:.:||.|.||...:|||:|
  Fly   320 MADITSYDYDAPMTEAGDPTPKYQALRRIIGRYLPLPNQPVPGPVPKRSYGTVRLTTCCSLLSSE 384

  Fly   410 GRAALSKGDPVESIKPKTFEELDLYSGLVLYETELPSMDLDPALLKIDQINDRAHVFVDQELVGT 474
            .|:.||.|. |:|.|||:||.|..|||||||||.|||...||::|.:..:.||.:|:||.|.||.
  Fly   385 ARSRLSTGF-VQSAKPKSFEALGQYSGLVLYETWLPSFQRDPSILSVPGLADRGYVYVDGEFVGI 448

  Fly   475 LSREAQIYSLPLSKGWGSTLQLLVENQGRVNFYIS-NDTKGIFGEVSLQLHNGGYLPLENWRSTA 538
            |:||..::.||||...|...|::||||||:|:... ||.|||..:|.|...     .|.||..|.
  Fly   449 LARETPVFELPLSASAGRRFQIIVENQGRINYGRQLNDFKGILRDVRLDKQ-----VLSNWNMTQ 508

  Fly   539 FPLEQ-SAVE--LWRREHTDEKALDPLLARQRILRNGPILYTGSLTV---TEVGDTYLNMAGWGK 597
            ||||. ..:|  :.:.:....:....|...:.:||.||.:|.|.|.:   :::.||||:|:||||
  Fly   509 FPLESYDNLEQLITQSDEAVRQGFQELKKLRTMLRTGPAIYHGQLDIQKESDLADTYLDMSGWGK 573

  Fly   598 GVAYVNGFNLGRYWPVAGPQVTLYVPNEILKVGENSLVILEYQRANKTATGEDL 651
            |:.:|||.|||||||:.|||||||||..:||.|.|.||::|||   :|...::|
  Fly   574 GIVFVNGENLGRYWPLVGPQVTLYVPAAVLKAGSNRLVVVEYQ---QTPASQEL 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalNP_608978.2 Glyco_hydro_35 54..376 CDD:396048 190/323 (59%)
BetaGal_dom4_5 <570..637 CDD:463857 41/69 (59%)
Ect3NP_650142.1 Glyco_hydro_35 32..350 CDD:396048 190/323 (59%)
BetaGal_dom4_5 <576..616 CDD:463857 26/39 (67%)

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