DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gal and Glb1l2

DIOPT Version :9

Sequence 1:NP_608978.2 Gene:Gal / 33839 FlyBaseID:FBgn0001089 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_006510360.1 Gene:Glb1l2 / 244757 MGIID:2388283 Length:676 Species:Mus musculus


Alignment Length:686 Identity:228/686 - (33%)
Similarity:342/686 - (49%) Gaps:84/686 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRNRKLTMAVSGCLIIAVMALTVGLCVGLSGDTDAPE----------------EQPRFTIDHEAN 53
            |..|...:.|...|.:|..:......||.|..:.|.|                :..|..:..:..
Mouse    28 RSPRVFMLNVVSVLFLAAASACSSPAVGPSPGSSAEESHLSRLNWSTLVPLWLQHQRLGLRTKGP 92

  Fly    54 TFMLDGQPFRYVSGSFHYFRAVPESWRSRLRTMRASGLNALDTYVEWSLHNPHDGEYNWEGIADV 118
            .|:|:...|:.:.||.||||...|.||.||..::|.|||.|.|||.|:||.|..|::::.|..|:
Mouse    93 DFILEDSIFQILGGSIHYFRVPREYWRDRLLKLKACGLNTLTTYVPWNLHEPERGKFDFSGNLDL 157

  Fly   119 VKFLEIAQEEDFYIILRPGPYICAERDNGGLPHWLFTKYPSIKMRTNDPNYISEVGKWYAELMPR 183
            ..|:::|.:...::|||||||||:|.|.||||.||. :.|.:|:||....:...|..::..||.|
Mouse   158 EAFIQLAAKIGLWVILRPGPYICSEIDLGGLPSWLL-QDPDMKLRTTYHGFTKAVDLYFDHLMSR 221

  Fly   184 LQHLFVGNGGKIIMVQVENEYGDYACDHDYLNWLRDETEKYVSGKAL--------LFTVDIPNEK 240
            :..|...:||.||.||||||||.|..|..|:.:::         |||        |.|.| ..:.
Mouse   222 VVPLQYKHGGPIIAVQVENEYGSYNKDRAYMPYIK---------KALEDRGIIEMLLTSD-NKDG 276

  Fly   241 MSCGKIENVFATTDFGIDRINEIDKIWAMLRALQPTGPLVNSEFYPGWLTHWQEQNQRRDGQEVA 305
            :..|.::.|.||  ..:....|:..:..:|.::|...|.:..|::.||...|...:...|..||.
Mouse   277 LEKGVVDGVLAT--INLQSQQELMALNTVLLSIQGIQPKMVMEYWTGWFDSWGGSHNILDSSEVL 339

  Fly   306 NALRTILSYNASVNLYMFFGGTNFGFTAGANYNLDGGIGYAADITSYDYDAVMDEAGGVTTKYNL 370
            ..:..|:...:|:|||||.|||||||..||.:..|    |.||:|||||||::.|||..|.||..
Mouse   340 QTVSAIIKDGSSINLYMFHGGTNFGFINGAMHFND----YKADVTSYDYDAILTEAGDYTAKYTK 400

  Fly   371 VKAVIGEFL-----PLPEITLNPAKRLAYGRVELTPKLTLLSTEGRAALSKGDPVESIKPKTFEE 430
            ::.:.|...     |.||:|    .::.|  ..::|.|.|...:....:.|  ||.|..|...|.
Mouse   401 LRELFGTVSGIPPPPPPELT----AKMVY--EPMSPALYLSLWDAIQYMDK--PVTSETPINMEN 457

  Fly   431 LDLYS------GLVLYETELPSMDLDPALLKIDQINDRAHVFVDQELVGTLSREAQIYSLPLSKG 489
            |.:.:      |.|||||.:.|..:...|     :.||..||:::..:|.|..:....::||::|
Mouse   458 LPVNNGNGQAFGYVLYETTIFSSGVLSGL-----VRDRGQVFLNRVSIGFLDYKTTKITIPLTQG 517

  Fly   490 WGSTLQLLVENQGRVNF--YISNDTKGIFGEVSLQLHNGGYLPLENWRSTAFPLEQSAVELWRRE 552
            : :.|::||||:||||:  .|.:..||:.|  :|.|:|..   |:|::  .:.|:.:...|.|.:
Mouse   518 Y-TILRILVENRGRVNYGNNIDSQRKGLIG--NLYLNNKA---LKNFK--IYSLDMTKQFLQRFD 574

  Fly   553 HTDEKALDPLLARQRILRNGPILYTGSLTV-TEVGDTYLNMAGWGKGVAYVNGFNLGRYWPVAGP 616
            ..:...:...|       ..|..:.|:|:| ....||:|.:.||.|||.:|||.||||||.| ||
Mouse   575 MDNWSVIPKEL-------TFPAFFLGALSVGIYPSDTFLKLEGWVKGVVFVNGHNLGRYWNV-GP 631

  Fly   617 QVTLYVPNEILKVGENSLVILEYQRANKTATGEDLP 652
            |.|||:|...|..|.|.::|.|...:.......|:|
Mouse   632 QETLYLPGVWLDKGINKVIIFEETMSGSMVQSTDIP 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalNP_608978.2 Glyco_hydro_35 54..376 CDD:279624 126/329 (38%)
BetaGal_dom4_5 <570..637 CDD:290101 32/67 (48%)
Glb1l2XP_006510360.1 Glyco_hydro_35 93..406 CDD:366567 126/329 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843238
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1874
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52178
OrthoDB 1 1.010 - - D179316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100579
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.660

Return to query results.
Submit another query.